RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CETN2P41208 172 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 HDAC4P56524 1084 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 TAS2R40P59535 323 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 SLC20A2Q08357 652 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 C1orf61Q13536 156 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 PDE1CQ14123 709 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CDKN3Q16667 212 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CCDC181Q5TID7 509 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 KIAA1161Q6NSJ0 714 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 RWDD4Q6NW29 188 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 SCYL2Q6P3W7 929 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 KYAT3Q6YP21 454 aaKnown RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 PYROXD2Q8N2H3 581 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 FAM181AQ8N9Y4 354 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 IFI44Q8TCB0 444 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CENPIQ92674 756 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-202ENST00000396828 IFT43Q96FT9 208 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 HIC2Q96JB3 615 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 KLHL32Q96NJ5 620 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CARD9Q9H257 536 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 ZWILCHQ9H900 591 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 CDC23Q9UJX2 597 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 LRRK1Q38SD2 2015 aa10.45□□□□□ -0.74
NEDD8-202ENST00000396828 EIF4E1BA6NMX2 242 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 KRIT1O00522 736 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 AREL1O15033 823 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ATXN7O15265 892 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 INSIG1O15503 277 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ZRANB2O95218 330 aaKnown RBP eCLIP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CELA2BP08218 269 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 RHOQP17081 205 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 JUNDP17535 347 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CXCR5P32302 372 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ACTN2P35609 894 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 IGFALSP35858 605 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PAFAH1B1P43034 410 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PEX5P50542 639 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 AIF1P55008 147 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PFN3P60673 137 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 HNRNPKP61978 463 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■□□□□ 9.7
NEDD8-202ENST00000396828 CXADRP78310 365 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 GABREP78334 506 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 SLC25A11Q02978 314 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CCDC15Q0P6D6 951 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 WHAMMP3Q1A5X7 153 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 DEFB133Q30KQ1 61 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 MYLK3Q32MK0 819 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ARL13BQ3SXY8 428 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 BOLA3Q53S33 107 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ZNF805Q5CZA5 627 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PERM1Q5SV97 790 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 SEL1L2Q5TEA6 688 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PARGQ86W56 976 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CPNE8Q86YQ8 564 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 KATNAL2Q8IYT4 538 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 RCOR2Q8IZ40 523 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 LMX1AQ8TE12 382 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 KRT35Q92764 455 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ISG20Q96AZ6 181 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 RBM41Q96IZ5 413 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 LENG8Q96PV6 779 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CLPBQ9H078 707 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CPNE5Q9HCH3 593 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 ASCL3Q9NQ33 180 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 MBNL1Q9NR56 388 aaKnown RBP10.44□□□□□ -0.74
NEDD8-202ENST00000396828 TMEM248Q9NWD8 314 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 RNF14Q9UBS8 474 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 PCSK1NQ9UHG2 260 aa10.44□□□□□ -0.74
NEDD8-202ENST00000396828 CPED1A4D0V7 1026 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 NEMP2A6NFY4 417 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 FPGTO14772 594 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 AQP9O43315 295 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 KDELR3O43731 214 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 CEP104O60308 925 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 MMP20O60882 483 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 KRT1P04264 644 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 GP1BAP07359 652 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 ALPPL2P10696 532 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 RABIFP47224 123 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 MARCKSL1P49006 195 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 COPS2P61201 443 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 NRG1Q02297 640 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-202ENST00000396828 SGCGQ13326 291 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 TCEA2Q15560 299 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 ISXQ2M1V0 245 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 ACBD5Q5T8D3 534 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-202ENST00000396828 KCTD16Q68DU8 428 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 EFL1Q7Z2Z2 1120 aaKnown RBP10.43□□□□□ -0.74
NEDD8-202ENST00000396828 DCP2Q8IU60 420 aaKnown RBP10.43□□□□□ -0.74
NEDD8-202ENST00000396828 PSTKQ8IV42 348 aaKnown RBP10.43□□□□□ -0.74
NEDD8-202ENST00000396828 CCDC50Q8IVM0 306 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 MAP7D3Q8IWC1 876 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 PLPP6Q8IY26 295 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 ARFGAP1Q8N6T3 406 aa10.43□□□□□ -0.74
NEDD8-202ENST00000396828 KCTD6Q8NC69 237 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms