RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 USP7Q93009 1102 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 SELENOOQ9BVL4 669 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 GANQ9H2C0 597 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 MRPL40Q9NQ50 206 aaKnown RBP21.26■□□□□ 0.99
TRAF4-203ENST00000394925 SAMSN1Q9NSI8 373 aaKnown RBP21.26■□□□□ 0.99
TRAF4-203ENST00000394925 STARD5Q9NSY2 213 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 RNF215Q9Y6U7 377 aa21.26■□□□□ 0.99
TRAF4-203ENST00000394925 BSNQ9UPA5 3926 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 TMEM202A6NGA9 273 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 BUB1BO60566 1050 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-203ENST00000394925 ITGB6P18564 788 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 BRAT1Q6PJG6 821 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 OGFOD3Q6PK18 319 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 SPRED1Q7Z699 444 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 ZSWIM9Q86XI8 627 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 CAMK1DQ8IU85 385 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 OR56A4Q8NGH8 313 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 FUBP1Q96AE4 644 aaKnown RBP21.25■□□□□ 0.99
TRAF4-203ENST00000394925 TMEM159Q96B96 161 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 ZNF641Q96N77 438 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-203ENST00000394925 CMKLR1Q99788 373 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 CATSPERBQ9H7T0 1116 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 FGF22Q9HCT0 170 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 ADAM22Q9P0K1 906 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 FOXJ2Q9P0K8 574 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 LRIT1Q9P2V4 623 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 ATP8A1Q9Y2Q0 1164 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 PCDHGA4Q9Y5G9 962 aa21.25■□□□□ 0.99
TRAF4-203ENST00000394925 B4DGG1 531 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 CACNB4O00305 520 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-203ENST00000394925 UNGP13051 313 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-203ENST00000394925 PNLIPP16233 465 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 ERCC5P28715 1186 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-203ENST00000394925 NSFP46459 744 aaKnown RBP21.24■□□□□ 0.99
TRAF4-203ENST00000394925 KLK7P49862 253 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 ARHGEF7Q14155 803 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 C14orf28Q4W4Y0 310 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 PHF19Q5T6S3 580 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 TRIM72Q6ZMU5 477 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 TMPRSS9Q7Z410 1059 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 UMODL1-AS1Q8N2C9 162 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 ZSCAN1Q8NBB4 408 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 PCDHB18PQ96TA0 734 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 TMEM168Q9H0V1 697 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 DPEP2Q9H4A9 486 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 TAB2Q9NYJ8 693 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 PCDHB11Q9Y5F2 797 aa21.24■□□□□ 0.99
TRAF4-203ENST00000394925 WASH4PA8MWX3 477 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 J3KR12 359 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 TERTO14746 1132 aaKnown RBP21.23■□□□□ 0.99
TRAF4-203ENST00000394925 CCP110O43303 1012 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 RECQL5O94762 991 aaPredicted RBP21.23■□□□□ 0.99
TRAF4-203ENST00000394925 SOX5P35711 763 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 KIAA1024LP59773 190 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 POLR2FP61218 127 aaKnown RBP21.23■□□□□ 0.99
TRAF4-203ENST00000394925 CYP4F2P78329 520 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 HLTFQ14527 1009 aaKnown RBP eCLIP21.23■□□□□ 0.99
TRAF4-203ENST00000394925 TBR1Q16650 682 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 TCP11X2Q5H9J9 407 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 ATG14Q6ZNE5 492 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 SLITRK4Q8IW52 837 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 CCL4L1Q8NHW4 92 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 SEMA6CQ9H3T2 930 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 PDFQ9HBH1 243 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 NLRC4Q9NPP4 1024 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 MOSPD1Q9UJG1 213 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 FZD10Q9ULW2 581 aa21.23■□□□□ 0.99
TRAF4-203ENST00000394925 C9orf172C9J069 976 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 WT1P19544 449 aaPredicted RBP21.22■□□□□ 0.99
TRAF4-203ENST00000394925 RGRP47804 291 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 GSCP56915 257 aaPredicted RBP21.22■□□□□ 0.99
TRAF4-203ENST00000394925 MAP9Q49MG5 647 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 SPECC1LQ69YQ0 1117 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 C3orf20Q8ND61 904 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 TUBGCP5Q96RT8 1024 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 CYP4F12Q9HCS2 524 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 FAM207AQ9NSI2 230 aaPredicted RBP21.22■□□□□ 0.99
TRAF4-203ENST00000394925 DACH1Q9UI36 760 aa21.22■□□□□ 0.99
TRAF4-203ENST00000394925 A0A1W2PQC6 194 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 SIGLEC16A6NMB1 481 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 SUV39H1O43463 412 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 NUDT21O43809 227 aaKnown RBP21.21■□□□□ 0.99
TRAF4-203ENST00000394925 CALB1P05937 261 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 SFTPCP11686 197 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 KELP23276 732 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 EEF1GP26641 437 aaKnown RBP21.21■□□□□ 0.99
TRAF4-203ENST00000394925 JAM2P57087 298 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 RALGDSQ12967 914 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 C16orf72Q14CZ0 275 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 LIPIQ6XZB0 460 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 SRLQ86TD4 932 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 DTX1Q86Y01 620 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 PAF1Q8N7H5 531 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
TRAF4-203ENST00000394925 CELF6Q96J87 481 aaKnown RBP21.21■□□□□ 0.99
TRAF4-203ENST00000394925 LGR4Q9BXB1 951 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 VPS16Q9H269 839 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 LRRC19Q9H756 370 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 ATP13A3Q9H7F0 1226 aa21.21■□□□□ 0.99
TRAF4-203ENST00000394925 RDH14Q9HBH5 336 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms