RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RHBDD1Q8TEB9 315 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 SAP25Q8TEE9 199 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ALG3Q92685 438 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 SKA1Q96BD8 255 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CENPTQ96BT3 561 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TSGA13Q96PP4 275 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TCEAL2Q9H3H9 227 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC32A1Q9H598 525 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 GRPEL1Q9HAV7 217 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 UCKL1Q9NWZ5 548 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PNMA8BQ9ULN7 279 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TPX2Q9ULW0 747 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CHKBQ9Y259 395 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CAPN6Q9Y6Q1 641 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CACNA1AO00555 2505 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TMEM131Q92545 1883 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 GON4LQ3T8J9 2241 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 K7ESM1 405 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PPP1R12AO14974 1030 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 FFAR2O15552 330 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 FLRT2O43155 660 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 FZD6O60353 706 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 SOCS5O75159 536 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 RECQL5O94762 991 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ITGAVP06756 1048 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ADRB1P08588 477 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ELFN1P0C7U0 828 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF883P0CG24 379 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PYGMP11217 842 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 MYF5P13349 255 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CEACAM1P13688 526 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZFXP17010 805 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTPN3P26045 913 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CTNNA2P26232 953 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARRB1P49407 418 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PEX5P50542 639 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 GSDMDP57764 484 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PFN3P60673 137 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 IFI35P80217 286 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 SKOR1P84550 965 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCZ1BP86790 482 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCZ1P86791 482 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 KIF5AQ12840 1032 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 DNAJC3Q13217 504 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC14A1Q13336 389 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 TFDP2Q14188 446 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 FZD2Q14332 565 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 GALNT3Q14435 633 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRC14Q15048 493 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ACOX1Q15067 660 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PDK1Q15118 436 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PRKD1Q15139 912 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 TRIP6Q15654 476 aaKnown RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CNGA3Q16281 694 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 WSCD2Q2TBF2 565 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 TFDP3Q5H9I0 405 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARMC12Q5T9G4 340 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 KCTD16Q68DU8 428 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 LIPIQ6XZB0 460 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 DPPA4Q7L190 304 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 KDELC2Q7Z4H8 507 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 HSD11B1LQ7Z5J1 315 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 NT5DC3Q86UY8 548 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 IQCHQ86VS3 1027 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 VSIG1Q86XK7 387 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRC49Q8IUZ0 686 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 RCOR2Q8IZ40 523 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 RBFAQ8N0V3 343 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 LPCAT1Q8NF37 534 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 EXD1Q8NHP7 514 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 SPATA22Q8NHS9 363 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 KIAA1524Q8TCG1 905 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 HCAR2Q8TDS4 363 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PIH1D2Q8WWB5 315 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 FUBP1Q96AE4 644 aaKnown RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 RBM41Q96IZ5 413 aaKnown RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 LENG8Q96PV6 779 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 RBM15Q96T37 977 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 IL12RB2Q99665 862 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 TDRD1Q9BXT4 1180 aaKnown RBP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 GPR27Q9NS67 375 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 DNAJC28Q9NX36 388 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 CD84Q9UIB8 345 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 OR1A2Q9Y585 309 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCDHA3Q9Y5H8 950 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 ADGRG1Q9Y653 693 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 HS3ST3A1Q9Y663 406 aa7.7□□□□□ -1.18
HMGB3P1-201ENST00000393368 TRIM38O00635 465 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 SNPHO15079 494 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 DDX3YO15523 660 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCDHGA12O60330 932 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 MAGEC1O60732 1142 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 HEXIM1O94992 359 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 MT-CYBP00156 380 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PRLP01236 227 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC4A1P02730 911 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 CELA2BP08218 269 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms