RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 DPTQ07507 201 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 PPP1R21Q6ZMI0 780 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 USP45Q70EL2 814 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ZDHHC18Q9NUE0 388 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 UGT2B4P06133 528 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 CDH17Q12864 832 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 GPS1Q13098 491 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 LOXL4Q96JB6 756 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 ORAI3Q9BRQ5 295 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 NEBLO76041 1014 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 STC1P52823 247 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 TAF1AQ15573 450 aaPredicted RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 ERAP2Q6P179 960 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 NLRP9Q7RTR0 991 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 CAND1Q86VP6 1230 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 ZNF366Q8N895 744 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 BRSK1Q8TDC3 778 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 DNASE2BQ8WZ79 361 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 CEP41Q9BYV8 373 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 NEUROG2Q9H2A3 272 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 PCDHGC4Q9Y5F7 938 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 MAGEB16A2A368 324 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 PDHA1P08559 390 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 WASP42768 502 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 RPL21P46778 160 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 SARNPP82979 210 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 PDPK2PQ6A1A2 396 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 CYS1Q717R9 158 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 NOA1Q8NC60 698 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 LRFN3Q9BTN0 628 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 LRRC1Q9BTT6 524 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
USP44-202ENST00000393091 UTP11Q9Y3A2 253 aaKnown RBP13.32□□□□□ -0.28
USP44-202ENST00000393091 AGAP14A8MT82 685 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 IL1BP01584 269 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 TSHRP16473 764 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 HMGCLP35914 325 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 CUL1Q13616 776 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 PPP1R7Q15435 360 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 C8orf74Q6P047 294 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 HDDC3Q8N4P3 179 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 ZCCHC9Q8N567 271 aaKnown RBP13.31□□□□□ -0.28
USP44-202ENST00000393091 GRIN3AQ8TCU5 1115 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 SPACA7Q96KW9 195 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 HHIPQ96QV1 700 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 CARD6Q9BX69 1037 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 FBXL12Q9NXK8 326 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 GKP32189 559 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 HOXD12P35452 270 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 HNF1BP35680 557 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 METAP1P53582 386 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 USP39Q53GS9 565 aaKnown RBP13.31□□□□□ -0.28
USP44-202ENST00000393091 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 CRTC1Q6UUV9 634 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 ZDHHC24Q6UX98 284 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 CCNJLQ8IV13 435 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 IFT43Q96FT9 208 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 PLEKHG4BQ96PX9 1271 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 DYRK4Q9NR20 520 aa13.31□□□□□ -0.28
USP44-202ENST00000393091 TMEM63AO94886 807 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 PYGLP06737 847 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ACADMP11310 421 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ECHS1P30084 290 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ZNF140P52738 457 aaPredicted RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 RPS21P63220 83 aaKnown RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 ITKQ08881 620 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ANGPT1Q15389 498 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
USP44-202ENST00000393091 TSPYL1Q9H0U9 437 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 PCDHB9Q9Y5E1 797 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 STEAP4Q687X5 459 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 LIPIQ6XZB0 460 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 C1orf216Q8TAB5 229 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 FICDQ9BVA6 458 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 ZNF711Q9Y462 761 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 HS3ST3A1Q9Y663 406 aa13.3□□□□□ -0.28
USP44-202ENST00000393091 TTC24A2A3L6 582 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms