RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 HEMK1Q9Y5R4 338 aaPredicted RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 TUBAL3A6NHL2 446 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 A8MXQ7 604 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 MTRF1O75570 445 aaKnown RBP3.59□□□□□ -1.84
XRN1-202ENST00000392981 NFATC1O95644 943 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 ATXN1LP0C7T5 689 aaKnown RBP3.59□□□□□ -1.84
XRN1-202ENST00000392981 ARP10275 920 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 ELNP15502 786 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 CYP2A7P20853 494 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 RAP1GAPP47736 663 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 RPS6KA3P51812 740 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 SMN1Q16637 294 aaKnown RBP3.59□□□□□ -1.84
XRN1-202ENST00000392981 MST1LQ2TV78 715 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 FAM69BQ5VUD6 431 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 CCDC144NLQ6NUI1 221 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 LEKR1Q6ZMV7 388 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 ETV3LQ6ZN32 361 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 RALYLQ86SE5 291 aaKnown RBP3.59□□□□□ -1.84
XRN1-202ENST00000392981 CCDC190Q86UF4 302 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 MISPQ8IVT2 679 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 FITM2Q8N6M3 262 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 TMIEQ8NEW7 156 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 OR6C4Q8NGE1 309 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 LRRC39Q96DD0 335 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 PTPN18Q99952 460 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 HERC2P3Q9BVR0 1158 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 SETD4Q9NVD3 440 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 STEAP1Q9UHE8 339 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 RNF150Q9ULK6 438 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 SORCS3Q9UPU3 1222 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 ENTPD4Q9Y227 616 aa3.59□□□□□ -1.84
XRN1-202ENST00000392981 A0A0A6YYJ9 748 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 C13orf42A0A1B0GVH6 325 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 GRXCR1A8MXD5 290 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SPECC1L-ADORA2AF8WAN1 911 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CELF2O95319 508 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 RALBP11234 206 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 AREGP15514 252 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CHN1P15882 459 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 LBPP18428 481 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 IL10P22301 178 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CLCN5P51795 746 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PRRX1P54821 245 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TFAP4Q01664 338 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ATP1A4Q13733 1029 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 COTL1Q14019 142 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 DRAP1Q14919 205 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZSCAN26Q16670 478 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TRIM71Q2Q1W2 868 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 HFEQ30201 348 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CERCAMQ5T4B2 595 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 C1orf185Q5T7R7 199 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PRR23BQ6ZRT6 265 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZNF365Q70YC5 407 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SCYL3Q8IZE3 742 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 OR10H5Q8NGA6 315 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TMEM125Q96AQ2 219 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 CDKN2AIPNLQ96HQ2 116 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ABHD14AQ9BUJ0 271 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 IDI2Q9BXS1 227 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 LSG1Q9H089 658 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 XKR8Q9H6D3 395 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TMEM231Q9H6L2 316 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 HACD3Q9P035 362 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 MYO15AQ9UKN7 3530 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TARSL2A2RTX5 802 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 RAD51DO75771 328 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 KRT14P02533 472 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZNF18P17022 549 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 NF2P35240 595 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 NR0B1P51843 470 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 NUDT6P53370 316 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 YWHAZP63104 245 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 ASIC1P78348 528 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SCGB2A2Q13296 93 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TRA2AQ13595 282 aaKnown RBP eCLIP3.58□□□□□ -1.84
XRN1-202ENST00000392981 DOC2AQ14183 400 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 RPE65Q16518 533 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ANKS6Q68DC2 871 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 HEPHL1Q6MZM0 1159 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CLEC17AQ6ZS10 378 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 DSG4Q86SJ6 1040 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SPATA24Q86W54 205 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FAM219AQ8IW50 185 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 NECAB1Q8N987 351 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CNNM3Q8NE01 707 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 BPIFCQ8NFQ6 507 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SEPT8Q92599 483 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ERO1AQ96HE7 468 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PKP2Q99959 881 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SCNM1Q9BWG6 230 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 AMNQ9BXJ7 453 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PSME2Q9UL46 239 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TNFSF13BQ9Y275 285 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 UBE2J1Q9Y385 318 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 ERCC6L2Q5T890 1561 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CYR61O00622 381 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms