RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ABL2P42684 1182 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GRIA4P48058 902 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 AFF3P51826 1226 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 EPHB1P54762 984 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GEMP55040 296 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 RACK1P63244 317 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 FAM193AP78312 1265 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CDK18Q07002 472 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 OVGP1Q12889 678 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TRAF2Q12933 501 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SGCGQ13326 291 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MPP3Q13368 585 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 AGERQ15109 404 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SIX1Q15475 284 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TEAD4Q15561 434 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CSRP2Q16527 193 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 LPAL2Q16609 132 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ZNF284Q2VY69 593 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 P3H1Q32P28 736 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TMEM259Q4ZIN3 620 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ANKRD20A2Q5SQ80 823 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ANKRD20A1Q5TYW2 823 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ANKRD20A3Q5VUR7 823 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SLC23A3Q6PIS1 610 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 B4GALNT4Q76KP1 1039 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 DPPA4Q7L190 304 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 IQCHQ86VS3 1027 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 DEFB119Q8N690 84 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 DENND6BQ8NEG7 585 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 C1orf216Q8TAB5 229 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CXorf40AQ8TE69 158 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PDCD6IPQ8WUM4 868 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PIH1D2Q8WWB5 315 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 C1orf54Q8WWF1 131 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PIGKQ92643 395 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 IFT43Q96FT9 208 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 NSMCE3Q96MG7 304 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MCCC1Q96RQ3 725 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 LYSMD1Q96S90 227 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 RBM15Q96T37 977 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 TMEM121Q9BTD3 319 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 MLPHQ9BV36 600 aaPredicted RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 C1QTNF7Q9BXJ2 289 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 NUSAP1Q9BXS6 441 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SLC17A9Q9BYT1 436 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 CEP41Q9BYV8 373 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ZDHHC5Q9C0B5 715 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GBA3Q9H227 469 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 ARRDC1-AS1Q9H2J1 176 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 PCDH12Q9NPG4 1184 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GOLGA6AQ9NYA3 693 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 RSPH14Q9UHP6 348 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 EIF2B4Q9UI10 523 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SLC6A14Q9UN76 642 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 R3HDM2Q9Y2K5 976 aaKnown RBP6.8□□□□□ -1.32
UBBP1-201ENST00000392399 HS3ST3A1Q9Y663 406 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 NUMA1Q14980 2115 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 THADAQ6YHU6 1953 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 SHROOM3Q8TF72 1996 aa6.8□□□□□ -1.32
UBBP1-201ENST00000392399 GVINP1Q7Z2Y8 2422 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 GOLGA6L10A0A0M3HER8 536 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 LOC285095A0A1B0GVY8 99 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 RGSL1A5PLK6 1076 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 IGLON5A6NGN9 336 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ERI2A8K979 691 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 BHMG1C9JSJ3 638 aaPredicted RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 BCAT2O15382 392 aaPredicted RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 GFRA3O60609 400 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 GJB3O75712 270 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 NDST3O95803 873 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PAK4O96013 591 aaPredicted RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PRLP01236 227 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 SYPP08247 313 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PDHA1P08559 390 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 HLA-DPA1P20036 260 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MAOBP27338 520 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CASQ1P31415 396 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 AKT2P31751 481 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 VIPR1P32241 457 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 FDFT1P37268 417 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PLA2G5P39877 138 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 MMP12P39900 470 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 LIG3P49916 1009 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 WNT3AP56704 352 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ARHGEF7Q14155 803 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 IHHQ14623 411 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 STAT4Q14765 748 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 CYP1B1Q16678 543 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 NAPEPLDQ6IQ20 393 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 LIPIQ6XZB0 460 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ARHGEF18Q6ZSZ5 1173 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 NYAP1Q6ZVC0 841 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ARMCX6Q7L4S7 300 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ASCL5Q7RTU5 278 aa6.79□□□□□ -1.32
UBBP1-201ENST00000392399 ADAT2Q7Z6V5 191 aaKnown RBP6.79□□□□□ -1.32
UBBP1-201ENST00000392399 NLRP8Q86W28 1048 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms