RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ZNF155Q12901 538 aaPredicted RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 GRIK3Q13003 919 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 MYBPHQ13203 477 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 SNTA1Q13424 505 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 BIRC3Q13489 604 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 DHX34Q14147 1143 aaKnown RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 PWP2Q15269 919 aaKnown RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 NFIL3Q16649 462 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 AMZ1Q400G9 498 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 XKR9Q5GH70 373 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 TYW3Q6IPR3 259 aaKnown RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 ANKRD54Q6NXT1 300 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 H1FNTQ75WM6 255 aaPredicted RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 ZNF354CQ86Y25 554 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 FOXRED2Q8IWF2 684 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 KIAA2013Q8IYS2 634 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 SCCPDHQ8NBX0 429 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 AGBL3Q8NEM8 1001 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 BEST2Q8NFU1 509 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 SPATA3Q8NHX4 192 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 LNX1Q8TBB1 728 aaPredicted RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 PPM1EQ8WY54 764 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 APOPT1Q96IL0 206 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 TXNDC15Q96J42 360 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 SH3GL2Q99962 352 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 FAM110AQ9BQ89 295 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 H2AFJQ9BTM1 129 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 KCNN2Q9H2S1 579 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 UBTD1Q9HAC8 227 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 C17orf75Q9HAS0 396 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 BABAM1Q9NWV8 329 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 RRN3Q9NYV6 651 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 PROCRQ9UNN8 238 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 TMEM98Q9Y2Y6 226 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 PCDHGB1Q9Y5G3 927 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 CYP46A1Q9Y6A2 500 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 STON1Q9Y6Q2 735 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 ATXN2Q99700 1313 aaKnown RBP2.34□□□□□ -2.04
RNU6-541P-201ENST00000384709 LINC01553A4QN01 128 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 GOLGA6L9A6NEM1 432 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TULP2O00295 520 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TNFSF14O43557 240 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 PLRG1O43660 514 aaKnown RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ATP2C2O75185 946 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NDUFS7O75251 213 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TACC1O75410 805 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 MTA2O94776 668 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TFPIP10646 304 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 CNTFP26441 200 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 SSTR2P30874 369 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 CPOXP36551 454 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 PIGAP37287 484 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 PEX5P50542 639 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TUBP50607 506 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 HDAC4P56524 1084 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NEDD9Q14511 834 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 TCTN1Q2MV58 587 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF672Q499Z4 452 aaPredicted RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC9B1Q4ZJI4 515 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 C9orf50Q5SZB4 431 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 INTS11Q5TA45 600 aaKnown RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC9C2Q5TAH2 1124 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 RHBDF2Q6PJF5 856 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 CPLX2Q6PUV4 134 aaKnown RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF771Q7L3S4 317 aaPredicted RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 CUZD1Q86UP6 607 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NOXA1Q86UR1 476 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZC3HC1Q86WB0 502 aaKnown RBP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NAGSQ8N159 534 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NFKBIDQ8NI38 313 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ST8SIA4Q92187 359 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 HVCN1Q96D96 273 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 HES6Q96HZ4 224 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC41A2Q96JW4 573 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 ADGRG7Q96K78 797 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 HAUS8Q9BT25 410 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 MAGEE1Q9HCI5 957 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 LTB4R2Q9NPC1 389 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 KLHL1Q9NR64 748 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 OCIAD1Q9NX40 245 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 MCM9Q9NXL9 1143 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 C1RLQ9NZP8 487 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 A4GNTQ9UNA3 340 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 PAM16Q9Y3D7 125 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 CNTNAP2Q9UHC6 1331 aa2.33□□□□□ -2.04
RNU6-541P-201ENST00000384709 DENND3A2RUS2 1198 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 RRN3P2A6NIE6 340 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 USP17L23D6RBM5 183 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF587BE7ETH6 402 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TNPO2O14787 897 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TSPAN4O14817 238 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 MID1O15344 667 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 DDNO94850 711 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CLDN14O95500 239 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 F7P08709 466 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 IRF1P10914 325 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 EDN2P20800 178 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 POU1F1P28069 291 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 EPHA8P29322 1005 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms