RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PCID2Q5JVF3 399 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 NUP93Q8N1F7 819 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 IGSF5Q9NSI5 407 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
NKX3-1-201ENST00000380871 A0A0U1RQF3 1178 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 ARHGEF37A1IGU5 675 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 NT5C1B-RDH14C9J2C7 533 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TIPRLO75663 272 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 CAPNS1P04632 268 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 RPL9P32969 192 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 YBX1P67809 324 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC39A8Q9C0K1 460 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 BRD8Q9H0E9 1235 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 IL1RL2Q9HB29 575 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HCSTQ9UBK5 93 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 PTGDR2Q9Y5Y4 395 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF839A8K0R7 811 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 UGT1A6P19224 532 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HADHAP40939 763 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 C6orf10Q5SRN2 563 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TMEM126BQ8IUX1 230 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TSPAN14Q8NG11 270 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 KLHL5Q96PQ7 755 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 CCT7Q99832 543 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TMEM79Q9BSE2 394 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TRIM8Q9BZR9 551 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 RBM22Q9NW64 420 aaKnown RBP eCLIP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 BCAP29Q9UHQ4 241 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HTTP42858 3142 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 A8MT66 165 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 PSMD12O00232 456 aaPredicted RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 UBFD1O14562 309 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TMCC1O94876 653 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 ETFBP38117 255 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 HPCAP84074 193 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 RAB41Q5JT25 222 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 ANKRD49Q8WVL7 239 aa16.34■□□□□ 0.21
NKX3-1-201ENST00000380871 TRIM24O15164 1050 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 UBDO15205 165 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 MTSS1O43312 755 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 HOXC8P31273 242 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 EFEMP1Q12805 493 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CYHR1Q6ZMK1 362 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CUZD1Q86UP6 607 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CNTN4Q8IWV2 1026 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 PPWD1Q96BP3 646 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 PABPC5Q96DU9 382 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 FAM193BQ96PV7 902 aaPredicted RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 FBXO5Q9UKT4 447 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CNOT6Q9ULM6 557 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 NEU3Q9UQ49 428 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 TRPC5OSA6NMA1 111 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CPB1P15086 417 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 HCAR3P49019 387 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 GATMP50440 423 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 HK2P52789 917 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 NR1H2P55055 460 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 USP41Q3LFD5 358 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 PIWIL4Q7Z3Z4 852 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CIR1Q86X95 450 aaPredicted RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 ARHGAP12Q8IWW6 846 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 MRPL57Q9BQC6 102 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 UNC93B1Q9H1C4 597 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 RHBDL2Q9NX52 303 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 PLK2Q9NYY3 685 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 SUCOQ9UBS9 1254 aaKnown RBP16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 TMCO1Q9UM00 188 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.2
NKX3-1-201ENST00000380871 SCN4AP35499 1836 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 NPHS1O60500 1241 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 KPNA6O60684 536 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 HLA-DQB2P05538 268 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 C8BP07358 591 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 ATP5F1P24539 256 aaPredicted RBP16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 CD151P48509 253 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 NDST2P52849 883 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 PRAMEP78395 509 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 RHDQ02161 417 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 VAT1Q99536 393 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 TCAF1Q9Y4C2 921 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 PDE4DIPQ5VU43 2346 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 HEATR9A2RTY3 570 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SOCS2O14508 198 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 GNAO1P09471 354 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 KCNC1P48547 511 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SLC7A2P52569 658 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 PRKAA2P54646 552 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 SLC12A2P55011 1212 aa16.32■□□□□ 0.2
NKX3-1-201ENST00000380871 MGAT3Q09327 533 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms