RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 DSC3Q14574 896 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 RPS6KA2Q15349 733 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 PTGR2Q8N8N7 351 aaPredicted RBP15.67■□□□□ 0.1
BRF1-203ENST00000379937 ATP6V0D2Q8N8Y2 350 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 SIDT2Q8NBJ9 832 aaKnown RBP15.67■□□□□ 0.1
BRF1-203ENST00000379937 FAM110BQ8TC76 370 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 PPWD1Q96BP3 646 aaKnown RBP15.67■□□□□ 0.1
BRF1-203ENST00000379937 SLC30A3Q99726 388 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 ASCC3Q8N3C0 2202 aaKnown RBP15.67■□□□□ 0.1
BRF1-203ENST00000379937 ARVCFO00192 962 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 NDC80O14777 642 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 CCL16O15467 120 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 ZNF623O75123 536 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 ALDH1A3P47895 512 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 MAP3K21Q5TCX8 1036 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 HECTD2Q5U5R9 776 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 PAQR3Q6TCH7 311 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 TMEM207Q6UWW9 146 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 ICA1LQ8NDH6 482 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 NTAN1Q96AB6 310 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 PTCD3Q96EY7 689 aaKnown RBP15.67■□□□□ 0.1
BRF1-203ENST00000379937 LRCH3Q96II8 777 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 GCNAQ96QF7 691 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 SMOC2Q9H3U7 446 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 CSNK1G1Q9HCP0 422 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 MID1IP1Q9NPA3 183 aa15.67■□□□□ 0.1
BRF1-203ENST00000379937 SF3B1O75533 1304 aaKnown RBP eCLIP15.67■□□□□ 0.15e-6■■■■■ 60.9
BRF1-203ENST00000379937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 E5RI56 91 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 BTN3A1O00481 513 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 CCND1P24385 295 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 OXCT1P55809 520 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 NTHL1P78549 312 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 ZNF177Q13360 481 aaPredicted RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 TSNQ15631 228 aaKnown RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 MBOAT1Q6ZNC8 495 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 KBTBD2Q8IY47 623 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 PIANPQ8IYJ0 282 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 OR10Q1Q8NGQ4 319 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 KCNN1Q92952 543 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 FAM149AA5PLN7 773 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 M0QZQ0 153 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 MAP3K7O43318 606 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 GABRR2P28476 465 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 C1QTNF8P60827 252 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 YBX1P67809 324 aaKnown RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 CDK18Q07002 472 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 ZNF648Q5T619 568 aaPredicted RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 KCTD11Q693B1 232 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 PAOXQ6QHF9 649 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 DNAJC9Q8WXX5 260 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 GPR63Q9BZJ6 419 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 RHOJQ9H4E5 214 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 COPS7BQ9H9Q2 264 aaPredicted RBP15.66■□□□□ 0.1
BRF1-203ENST00000379937 KCNK4Q9NYG8 393 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 ZNF180Q9UJW8 692 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 TRHDEQ9UKU6 1024 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 NPEPPSL1A6NEC2 478 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 PRR23AA6NEV1 266 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 TIMM44O43615 452 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 NDUFS3O75489 264 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 PSMG1O95456 288 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 MIER2Q8N344 545 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 CLHC1Q8NHS4 586 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 SEPT8Q92599 483 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 GPR21Q99679 349 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 FBXO44Q9H4M3 255 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 EBF2Q9HAK2 575 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 AURKCQ9UQB9 309 aa15.66■□□□□ 0.1
BRF1-203ENST00000379937 NVLO15381 856 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 SBK3P0C264 359 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 CCDC15Q0P6D6 951 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 PSAPL1Q6NUJ1 521 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 KYAT3Q6YP21 454 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 OR13J1Q8NGT2 312 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 TUBGCP3Q96CW5 907 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 NAF1Q96HR8 494 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 VWA7Q9Y334 891 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 H3BMM5 538 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 NR5A2O00482 541 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 SEC24DO94855 1032 aaPredicted RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 VNN2O95498 520 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 GLP2RO95838 553 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 SERPINF2P08697 491 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 ITGB8P26012 769 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 RPL10P27635 214 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 ZXDBP98169 803 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 SLC22A15Q8IZD6 547 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 CMTM8Q8IZV2 173 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 APCDD1Q8J025 514 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 SREK1Q8WXA9 508 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 GFM2Q969S9 779 aaKnown RBP15.65■□□□□ 0.1
BRF1-203ENST00000379937 VPS33AQ96AX1 596 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 CASD1Q96PB1 797 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 BOCQ9BWV1 1114 aa15.65■□□□□ 0.1
BRF1-203ENST00000379937 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.65■□□□□ 0.17e-7■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms