RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 SYT12Q8IV01 421 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 DEFB119Q8N690 84 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 ATL2Q8NHH9 583 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 GRK7Q8WTQ7 553 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 PIH1D2Q8WWB5 315 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 ASB12Q8WXK4 309 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 SNX19Q92543 992 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 MAGOHBQ96A72 148 aaKnown RBP11.98□□□□□ -0.49
PCNA-201ENST00000379143 MCCC1Q96RQ3 725 aaPredicted RBP11.98□□□□□ -0.49
PCNA-201ENST00000379143 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 FSD1LQ9BXM9 530 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 AP1M1Q9BXS5 423 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 UBP1Q9NZI7 540 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 PAK5Q9P286 719 aa11.98□□□□□ -0.49
PCNA-201ENST00000379143 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 A0A0J9YYE9 177 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 LOC285095A0A1B0GVY8 99 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 CAPN8A6NHC0 703 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PRR5-ARHGAP8B1AHC4 643 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 ANKRD66B4E2M5 251 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 FANCGO15287 622 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PSMD3O43242 534 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 SPINT1O43278 529 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 LRP3O75074 770 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PHF2O75151 1096 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PMPCBO75439 489 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 NDST3O95803 873 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PRLP01236 227 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 TRBC1P01850 177 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 ELFN1P0C7U0 828 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 ITPKAP23677 461 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PSMB4P28070 264 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 VIPR1P32241 457 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 FDFT1P37268 417 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 FNTAP49354 379 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 WNT3AP56704 352 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PPP2CBP62714 309 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PPP2CAP67775 309 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 SGCGQ13326 291 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 IHHQ14623 411 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 ZNF284Q2VY69 593 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 LRRC73Q5JTD7 316 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PEAR1Q5VY43 1037 aaPredicted RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 CCDC137Q6PK04 289 aaKnown RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 LPCAT1Q8NF37 534 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 CEP76Q8TAP6 659 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 RUBCNQ92622 972 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 RMDN1Q96DB5 314 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 RUNDC3BQ96NL0 473 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 LYSMD1Q96S90 227 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 MLPHQ9BV36 600 aaPredicted RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 SLC17A9Q9BYT1 436 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 KCTD5Q9NXV2 234 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 NCDNQ9UBB6 729 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 PILRBQ9UKJ0 227 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 ZFR2Q9UPR6 939 aaKnown RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 ITM2BQ9Y287 266 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 NCOR2Q9Y618 2525 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 TNRC6BQ9UPQ9 1833 aaKnown RBP11.97□□□□□ -0.49
PCNA-201ENST00000379143 SPAG17Q6Q759 2223 aa11.97□□□□□ -0.49
PCNA-201ENST00000379143 CACNA1BQ00975 2339 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 ERI2A8K979 691 aaKnown RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 PRAMEF26H0Y7S4 382 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 CCDC188H7C350 402 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 PSMD11O00231 422 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 FOXD2O60548 495 aaPredicted RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 TM7SF2O76062 418 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 GAS8O95995 478 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 PYGBP11216 843 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 ZNF30P17039 623 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 HLA-DPA1P20036 260 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 HNRNPA2B1P22626 353 aaKnown RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 COILP38432 576 aaPredicted RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 MPLP40238 635 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 KCNJ1P48048 391 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 LIG3P49916 1009 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 ARHGEF7Q14155 803 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 AGERQ15109 404 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 KDELC1Q6UW63 502 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 KLHDC8BQ8IXV7 354 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 RAVER1Q8IY67 606 aaKnown RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 FAM174AQ8TBP5 190 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 PIGKQ92643 395 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 SKA1Q96BD8 255 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 LENG8Q96PV6 779 aaPredicted RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 TRIB3Q96RU7 358 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 WRAP53Q9BUR4 548 aaKnown RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 MIR1-1HGQ9H1L0 117 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 MAGEE1Q9HCI5 957 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 SMARCAL1Q9NZC9 954 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
PCNA-201ENST00000379143 EIF2B4Q9UI10 523 aaKnown RBP11.96□□□□□ -0.49
PCNA-201ENST00000379143 GGT7Q9UJ14 662 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms