RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ABCG4Q9H172 646 aa13.9□□□□□ -0.18
PRPF18-202ENST00000378572 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
PRPF18-202ENST00000378572 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
PRPF18-202ENST00000378572 ACTL7AQ9Y615 435 aa13.9□□□□□ -0.18
PRPF18-202ENST00000378572 MYLKQ15746 1914 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 NEMP2A6NFY4 417 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 PAK4O96013 591 aaPredicted RBP13.89□□□□□ -0.19
PRPF18-202ENST00000378572 CD48P09326 243 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 MYF5P13349 255 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 IL4RP24394 825 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 ACTN2P35609 894 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 ACVRL1P37023 503 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 ARF5P84085 180 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 TFDP2Q14188 446 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 POLD3Q15054 466 aaPredicted RBP13.89□□□□□ -0.19
PRPF18-202ENST00000378572 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 SLC22A18ASQ8N1D0 253 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 LRRN4CLQ8ND94 238 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 KCTD15Q96SI1 283 aaPredicted RBP13.89□□□□□ -0.19
PRPF18-202ENST00000378572 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 OSBPL2Q9H1P3 480 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 CAAP1Q9H8G2 361 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 GPATCH2LQ9NWQ4 482 aa13.89□□□□□ -0.19
PRPF18-202ENST00000378572 TDRD6O60522 2096 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 FPGTO14772 594 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 CTIFO43310 598 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 NEBLO76041 1014 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 GKP32189 559 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 HTR7P34969 479 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 ARL4AP40617 200 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 EIF2S3P41091 472 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 HCAR3P49019 387 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 GEMIN4P57678 1058 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 HNRNPKP61978 463 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 KYAT3Q6YP21 454 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 ABI3BPQ7Z7G0 1075 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 APOLD1Q96LR9 279 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 FCRL3Q96P31 734 aaPredicted RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 BBC3Q96PG8 261 aaPredicted RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 RNF157Q96PX1 679 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 DEPDC7Q96QD5 511 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 LGMNQ99538 433 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 NLGN3Q9NZ94 848 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 OR12D3Q9UGF7 316 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 ITM2BQ9Y287 266 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 PCDHB1Q9Y5F3 818 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 FADS3Q9Y5Q0 445 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 FASNP49327 2511 aaKnown RBP13.88□□□□□ -0.19
PRPF18-202ENST00000378572 KNTC1P50748 2209 aa13.88□□□□□ -0.19
PRPF18-202ENST00000378572 H3BRJ5 948 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 RAMP2O60895 175 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PHF2O75151 1096 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 UGT2B4P06133 528 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 KRT10P13645 584 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 RABIFP47224 123 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 DUSP3P51452 185 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 C2orf54Q08AI8 447 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 RTP5Q14D33 572 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 ANKRD20A8PQ5CZ79 823 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PARGQ86W56 976 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 DCBLD1Q8N8Z6 715 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PRELID2Q8N945 189 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 FAM174AQ8TBP5 190 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 MAPK15Q8TD08 544 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 FGF11Q92914 225 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 NAF1Q96HR8 494 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 UBL7Q96S82 380 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 DUSP23Q9BVJ7 150 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 FRMD8P1Q9BZ68 369 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 LRRC19Q9H756 370 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 DOCK4Q8N1I0 1966 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 POM121BA6NF01 834 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 IGLON5A6NGN9 336 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 RAD51BO15315 384 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 ZNF821O75541 412 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 CKMT1AP12532 417 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 ZFXP17010 805 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 MAPKAPK2P49137 400 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 SNRPD1P62314 119 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 CCNG2Q16589 344 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 GLE1Q53GS7 698 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 LRRC73Q5JTD7 316 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 SLC9A4Q6AI14 798 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 ZNF548Q8NEK5 533 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms