RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PCDH19Q8TAB3 1148 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 TRIM11Q96F44 468 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 C1QTNF7Q9BXJ2 289 aa19.31■□□□□ 0.68
CBWD3-204ENST00000377349 TMEM191CA6NGB0 347 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 J3KR12 359 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 PEX5P50542 639 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 CLN3Q13286 438 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 SMTNL2Q2TAL5 461 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 TAF1BQ53T94 588 aaPredicted RBP19.3■□□□□ 0.68
CBWD3-204ENST00000377349 RFX8Q6ZV50 586 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 B3GNT8Q7Z7M8 397 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 ARL10Q8N8L6 244 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 WDR36Q8NI36 951 aaKnown RBP19.3■□□□□ 0.68
CBWD3-204ENST00000377349 WDR48Q8TAF3 677 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 HSPH1Q92598 858 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 GLMNQ92990 594 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 TSACCQ96A04 125 aaPredicted RBP19.3■□□□□ 0.68
CBWD3-204ENST00000377349 ZWILCHQ9H900 591 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 SP110Q9HB58 689 aa19.3■□□□□ 0.68
CBWD3-204ENST00000377349 ARHGAP42A6NI28 874 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 K7ENP7 123 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 BUB1BO60566 1050 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 GZMAP12544 262 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 C6P13671 934 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 SSR1P43307 286 aaKnown RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 PAPOLAP51003 745 aaKnown RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 SUOXP51687 545 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 SPIDRQ14159 915 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 LRRC14Q15048 493 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 AGERQ15109 404 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 UGP2Q16851 508 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 INO80CQ6PI98 192 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 FSTL5Q8N475 847 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 ARFGAP1Q8N6T3 406 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 EDEM3Q9BZQ6 932 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 SLC39A8Q9C0K1 460 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 LRRC19Q9H756 370 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 MRPL47Q9HD33 250 aaKnown RBP19.29■□□□□ 0.68
CBWD3-204ENST00000377349 PCDH12Q9NPG4 1184 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 DONSONQ9NYP3 566 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 IFNKQ9P0W0 207 aa19.29■□□□□ 0.68
CBWD3-204ENST00000377349 CCDC187A0A096LP49 1063 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 A0A1W2PQM1 296 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 MYBL1P10243 752 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 MMP12P39900 470 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 MLLT3P42568 568 aaPredicted RBP19.28■□□□□ 0.68
CBWD3-204ENST00000377349 ELP6Q0PNE2 266 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 LY6DQ14210 128 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 NFATC4Q14934 902 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 TCEA2Q15560 299 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 ESRP1Q6NXG1 681 aaKnown RBP19.28■□□□□ 0.68
CBWD3-204ENST00000377349 FOXR1Q6PIV2 292 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 LVRNQ6Q4G3 990 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 HID1Q8IV36 788 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 HCAR2Q8TDS4 363 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 CCDC74AQ96AQ1 378 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 LIN37Q96GY3 246 aaPredicted RBP19.28■□□□□ 0.68
CBWD3-204ENST00000377349 APOOQ9BUR5 198 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 CINPQ9BW66 212 aaPredicted RBP19.28■□□□□ 0.68
CBWD3-204ENST00000377349 SUV39H2Q9H5I1 410 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 SIRPGQ9P1W8 387 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 SDK2Q58EX2 2172 aa19.28■□□□□ 0.68
CBWD3-204ENST00000377349 LRCH4O75427 683 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 PALMO75781 387 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 TNFSF15O95150 251 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 ITGA2BP08514 1039 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 ERCC2P18074 760 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 HTR7P34969 479 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 RGRP47804 291 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 NDST2P52849 883 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 INPP5AQ14642 412 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 ELOCQ15369 112 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 ARL14Q8N4G2 192 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 PDXPQ96GD0 296 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 BTBD6Q96KE9 485 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 GULP1Q9UBP9 304 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 OR1A2Q9Y585 309 aa19.27■□□□□ 0.68
CBWD3-204ENST00000377349 MAST4O15021 2626 aa19.27■□□□□ 0.67
CBWD3-204ENST00000377349 TMEM110-MUSTN1A8MSY1 372 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 D6RAR5 112 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 EFSO43281 561 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 PRAMEF11O60813 436 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 RASGRP1O95267 797 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 PRKCGP05129 697 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 GJC1P36383 396 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 LIG3P49916 1009 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 BLKP51451 505 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 CCL7P80098 99 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 KIAA1614Q5VZ46 1190 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 ENPP7Q6UWV6 458 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 ARHGAP36Q6ZRI8 547 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 CAMK1DQ8IU85 385 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 SDR16C5Q8N3Y7 309 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 NPWQ8N729 165 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 PLA2G15Q8NCC3 412 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 FUBP1Q96AE4 644 aaKnown RBP19.26■□□□□ 0.67
CBWD3-204ENST00000377349 CCDC97Q96F63 343 aaPredicted RBP19.26■□□□□ 0.67
CBWD3-204ENST00000377349 THAP2Q9H0W7 228 aa19.26■□□□□ 0.67
CBWD3-204ENST00000377349 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms