RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 IRF2BP2Q7Z5L9 587 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 CLEC14AQ86T13 490 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 CAMK1DQ8IU85 385 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 OR56A4Q8NGH8 313 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 PCDH19Q8TAB3 1148 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 KIAA1524Q8TCG1 905 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 SNRNP27Q8WVK2 155 aaKnown RBP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 SPOCK2Q92563 424 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 ECHDC3Q96DC8 303 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 NAF1Q96HR8 494 aaKnown RBP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 CELF6Q96J87 481 aaKnown RBP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 PSKH2Q96QS6 385 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 RBM15Q96T37 977 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 BPIFA3Q9BQP9 254 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 SNRNP25Q9BV90 132 aaKnown RBP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 SLC39A8Q9C0K1 460 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 CLPBQ9H078 707 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 TCEAL2Q9H3H9 227 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-204ENST00000376643 A0A1W2PQC6 194 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 TMEM191CA6NGB0 347 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 CDRT15L2A8MXV6 281 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 J3KR12 359 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 DFFAO00273 331 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 NTN3O00634 580 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 SOCS5O75159 536 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 ERCC2P18074 760 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 SERPINB6P35237 376 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 PCK1P35558 622 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 ZNF235Q14590 738 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 PPP6R3Q5H9R7 873 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 PERM1Q5SV97 790 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 AFMIDQ63HM1 303 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 DPPA4Q7L190 304 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 APTXQ7Z2E3 356 aaKnown RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 NDUFAF2Q8N183 169 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 AOPEPQ8N6M6 819 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 TSACCQ96A04 125 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 WDR26Q9H7D7 661 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 AIPL1Q9NZN9 384 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 SIRPGQ9P1W8 387 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 CNOT8Q9UFF9 292 aaKnown RBP14.83□□□□□ -0.04
HDAC6-204ENST00000376643 PCSK1NQ9UHG2 260 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 COQ6Q9Y2Z9 468 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 PCDHGA7Q9Y5G6 932 aa14.83□□□□□ -0.04
HDAC6-204ENST00000376643 LRRC53A6NM62 1247 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 TMCO5BA8MYB1 307 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 D6RAR5 112 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 PLD2O14939 933 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 RECQL5O94762 991 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 TNFSF15O95150 251 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 FTLP02792 175 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CYP2A6P11509 494 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 GLB1P16278 677 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 MIPP30301 263 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CCKBRP32239 447 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 PRKCIP41743 596 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 SCNN1BP51168 640 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 INHBCP55103 352 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 SKOR1P84550 965 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 OGDHQ02218 1023 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CFHR1Q03591 330 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 TYRO3Q06418 890 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 KLHL30Q0D2K2 578 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 LBRQ14739 615 aaKnown RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 NCAPHQ15003 741 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CLPPQ16740 277 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 BOLA3Q53S33 107 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 FOXR1Q6PIV2 292 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 KYQ8NBH2 561 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 TSEN2Q8NCE0 465 aaKnown RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 CCDC74AQ96AQ1 378 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 ZNF653Q96CK0 615 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 SYT11Q9BT88 431 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 GPATCH2LQ9NWQ4 482 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 APPL1Q9UKG1 709 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 OR1A2Q9Y585 309 aa14.82□□□□□ -0.04
HDAC6-204ENST00000376643 BZW2Q9Y6E2 419 aaKnown RBP14.82□□□□□ -0.04
HDAC6-204ENST00000376643 PSMD11O00231 422 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 BUB1BO60566 1050 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-204ENST00000376643 RPLP0P05388 317 aaKnown RBP14.81□□□□□ -0.04
HDAC6-204ENST00000376643 ITIH2P19823 946 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 TPM4P67936 248 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 ARHGEF7Q14155 803 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 ARHGAP40Q5TG30 622 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 TMCO3Q6UWJ1 677 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 LIPIQ6XZB0 460 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 CCDC81Q6ZN84 652 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 RAB11FIP2Q7L804 512 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 TAF8Q7Z7C8 310 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 ZNF605Q86T29 641 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 LRRC49Q8IUZ0 686 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 FBXO39Q8N4B4 442 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 KCTD15Q96SI1 283 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-204ENST00000376643 LRRN3Q9H3W5 708 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 HAUS4Q9H6D7 363 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 EPB41L5Q9HCM4 733 aa14.81□□□□□ -0.04
HDAC6-204ENST00000376643 PHPT1Q9NRX4 125 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms