RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 KLHL2O95198 593 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 AOC1P19801 751 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 FCARP24071 287 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 GEMP55040 296 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 TUBB3Q13509 450 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 HTR4Q13639 388 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 POU6F1Q14863 301 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 DNAL1Q4LDG9 190 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 TIGD7Q6NT04 549 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 PKN3Q6P5Z2 889 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 PPHLN1Q8NEY8 458 aaKnown RBP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 OVCA2Q8WZ82 227 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 STMN2Q93045 179 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 RSPRY1Q96DX4 576 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 TSNARE1Q96NA8 513 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 SERPINB11Q96P15 392 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 MCMBPQ9BTE3 642 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 FICDQ9BVA6 458 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 ZFP14Q9HCL3 533 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 DNAJC28Q9NX36 388 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 E9PAM4 449 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 HSPA4LO95757 839 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 CKMP06732 381 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 SAT1P21673 171 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 DDX6P26196 483 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 ARRB2P32121 409 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 IDH3AP50213 366 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 GRM3Q14832 879 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 SNX30Q5VWJ9 437 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 SLC44A3Q8N4M1 653 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 ACVR1CQ8NER5 493 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 USP13Q92995 863 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 LRRC3BQ96PB8 259 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 GPR22Q99680 433 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 FSD1LQ9BXM9 530 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 COL25A1Q9BXS0 654 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 RHOJQ9H4E5 214 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 NDFIP2Q9NV92 336 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 RBM22Q9NW64 420 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC40-202ENST00000374876 MUTYHQ9UIF7 546 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 MID2Q9UJV3 735 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 ANKRD6Q9Y2G4 727 aa15.65■□□□□ 0.1
CCDC40-202ENST00000374876 TRAV19A0A0A6YYK7 116 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 G3V2L1 256 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 COCHO43405 550 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 H2AFYO75367 372 aaKnown RBP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 APOA4P06727 396 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ALOX15P16050 662 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 RAP1GDS1P52306 607 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ZXDBP98169 803 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 TAF11Q15544 211 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 CCDC6Q16204 474 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 UGP2Q16851 508 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ACSBG2Q5FVE4 666 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 CFAP157Q5JU67 520 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 RABGAP1LQ5R372 815 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 HECTD3Q5T447 861 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ATG14Q6ZNE5 492 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 MAVSQ7Z434 540 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ZC3HC1Q86WB0 502 aaKnown RBP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 RTL3Q8N8U3 475 aaKnown RBP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 OR6Y1Q8NGX8 325 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 FBXO27Q8NI29 283 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ZNF419Q96HQ0 510 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-202ENST00000374876 ZNF570Q96NI8 536 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 MPP6Q9NZW5 540 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 HS3ST4Q9Y661 456 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 NCOR1O75376 2440 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 TTC28Q96AY4 2481 aa15.64■□□□□ 0.09
CCDC40-202ENST00000374876 KCNU1A8MYU2 1149 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 TMEM114B3SHH9 223 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 TLR5O60602 858 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 TRIM13O60858 407 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 SIN3BO75182 1162 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 PMPCBO75439 489 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 PTDSS1P48651 473 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 GRM2Q14416 872 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 USP10Q14694 798 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 RCN1Q15293 331 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 MTSS1LQ765P7 747 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 WDR60Q8WVS4 1066 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 TDP1Q9NUW8 608 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 SMPD4Q9NXE4 827 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 CPSF2Q9P2I0 782 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 STOML1Q9UBI4 398 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 HEPACAM2A8MVW5 462 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 NARSO43776 548 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 VAPBO95292 243 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 HLA-DQB2P05538 268 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 PAPOLAP51003 745 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 CLNS1AP54105 237 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 C6orf163Q5TEZ5 329 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 VITQ6UXI7 678 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 C14orf80Q86SX3 495 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 LRRC49Q8IUZ0 686 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 SCUBE1Q8IWY4 988 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 CFAP61Q8NHU2 1237 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms