RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 ZIM3Q96PE6 472 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 FAM129BQ96TA1 746 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 CHRAC1Q9NRG0 131 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 MOCS1Q9NZB8 636 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 WNT16Q9UBV4 365 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 RPS6KL1Q9Y6S9 549 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 FAM169AQ9Y6X4 670 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 F5P12259 2224 aa17.3■□□□□ 0.36
HLA-DMA-201ENST00000374843 ADAM23O75077 832 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 SHBGP04278 402 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 PRKCGP05129 697 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 TIE1P35590 1138 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 EPHB1P54762 984 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 SEC13P55735 322 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 SEPT6Q14141 434 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 TAF1AQ15573 450 aaPredicted RBP17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 TSTD2Q5T7W7 516 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 KIAA0930Q6ICG6 404 aaPredicted RBP17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 UBALD2Q8IYN6 164 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 BLOC1S5Q8TDH9 187 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 RSPH9Q9H1X1 276 aaPredicted RBP17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 PPCSQ9HAB8 311 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 RABGEF1Q9UJ41 708 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
HLA-DMA-201ENST00000374843 FAM159BA6NKW6 160 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 UPK3BL1B0FP48 263 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 UPK3BL2E5RIL1 263 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 C1QTNF3-AMACRE9PGA6 284 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 CRTAMO95727 393 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 NMBRP28336 390 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 SLC8A1P32418 973 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 SUOXP51687 545 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 POLR2LP62875 67 aaKnown RBP17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 PDE1BQ01064 536 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 ZNF844Q08AG5 666 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 NAB1Q13506 487 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 CDKN3Q16667 212 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 KLHL38Q2WGJ6 581 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 TRMT10BQ6PF06 316 aaKnown RBP17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 CAPN12Q6ZSI9 719 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 USP45Q70EL2 814 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 PARS2Q7L3T8 475 aaKnown RBP17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 GLT6D1Q7Z4J2 308 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 NDUFAF2Q8N183 169 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 OR13J1Q8NGT2 312 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 PIP4K2CQ8TBX8 421 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 FBF1Q8TES7 1133 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 SCRN2Q96FV2 425 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 PPP1R16AQ96I34 528 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 PKNOX2Q96KN3 472 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 ZNF778Q96MU6 729 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 SMIM14Q96QK8 99 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 CYTH2Q99418 400 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 ACBD3Q9H3P7 528 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 ZDHHC4Q9NPG8 344 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 SARDHQ9UL12 918 aa17.28■□□□□ 0.36
HLA-DMA-201ENST00000374843 MYO10Q9HD67 2058 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 AGPSO00116 658 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 RNF40O75150 1001 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 KLF8O95600 359 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 IVLP07476 585 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 PIRTP0C851 137 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 CTPS1P17812 591 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 PAMP19021 973 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 ARNTP27540 789 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 HNF1BP35680 557 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 STARD6P59095 220 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 STARD3Q14849 445 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 RASA2Q15283 850 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 UGP2Q16851 508 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 SYNPOQ8N3V7 929 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 MDGA1Q8NFP4 955 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 OR2T3Q8NH03 318 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 STYXQ8WUJ0 223 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 CERS2Q96G23 380 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 ASB2Q96Q27 587 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 DHRS4Q9BTZ2 278 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 ROPN1Q9HAT0 212 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 ARL5AQ9Y689 179 aa17.27■□□□□ 0.36
HLA-DMA-201ENST00000374843 COL6A3P12111 3177 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 A0A1W2PQF6 199 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 NPIPB15A6NHN6 443 aaPredicted RBP17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 C2orf81A6NN90 581 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 C16orf96A6NNT2 1141 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 AURKAO14965 403 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 SYNCRIPO60506 623 aaKnown RBP17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 ALPIP09923 528 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 CHRNB1P11230 501 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 HOXB2P14652 356 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 TIMP2P16035 220 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 NFKBIAP25963 317 aa17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 ARCN1P48444 511 aaKnown RBP17.26■□□□□ 0.35
HLA-DMA-201ENST00000374843 COPAP53621 1224 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms