RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 CAPSQ13938 189 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 TIGD2Q4W5G0 525 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 BSPRYQ5W0U4 402 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 CES3Q6UWW8 571 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 ARMCX6Q7L4S7 300 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 CENPLQ8N0S6 344 aaPredicted RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 MUL1Q969V5 352 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 MRPL57Q9BQC6 102 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 SCUBE2Q9NQ36 999 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 ANKRD34BA5PLL1 514 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 SYNCRIPO60506 623 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 CLIC3O95833 236 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 CRHBPP24387 322 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 AXLP30530 894 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 TPTEP56180 551 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 GJA9P57773 515 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 STX1BP61266 288 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 GRM3Q14832 879 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 SPCS2Q15005 226 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX12-202ENST00000374274 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 TSTD2Q5T7W7 516 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 SLC16A12Q6ZSM3 486 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 PTRH1Q86Y79 214 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 GPC2Q8N158 579 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 MFSD4AQ8N468 514 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 LILRB4Q8NHJ6 448 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 DCPSQ96C86 337 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
SNX12-202ENST00000374274 GPR78Q96P69 363 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 HOXD1Q9GZZ0 328 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 FZD1Q9UP38 647 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 ST14Q9Y5Y6 855 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 RLFQ13129 1914 aa13.47□□□□□ -0.25
SNX12-202ENST00000374274 FAM149AA5PLN7 773 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 TMEM233B4DJY2 109 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 NDUFB5O43674 189 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 MGEA5O60502 916 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 KCNH1O95259 989 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 LDLRP01130 860 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 NR3C2P08235 984 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ITIH1P19827 911 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 SERPINB1P30740 379 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 GRK3P35626 688 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ETFBP38117 255 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ARL4AP40617 200 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 HMGCS2P54868 508 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 CDH8P55286 799 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 EPS8Q12929 822 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 TOP3AQ13472 1001 aaPredicted RBP13.46□□□□□ -0.25
SNX12-202ENST00000374274 AQP6Q13520 282 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 USP10Q14694 798 aaKnown RBP13.46□□□□□ -0.25
SNX12-202ENST00000374274 INAVAQ3KP66 663 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 AKAP14Q86UN6 197 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 SPARTQ8N0X7 666 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 UBA3Q8TBC4 463 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 CALML6Q8TD86 181 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 KCTD4Q8WVF5 259 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX12-202ENST00000374274 C12orf42Q96LP6 360 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 KCTD15Q96SI1 283 aaPredicted RBP13.46□□□□□ -0.25
SNX12-202ENST00000374274 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 GTSE1Q9NYZ3 720 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 HMGXB4Q9UGU5 601 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 SIX4Q9UIU6 781 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 POU2F3Q9UKI9 436 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 A0A087X1B8 175 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ILVBLA1L0T0 632 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ARPC2O15144 300 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 GRAP2O75791 330 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 FARP2O94887 1054 aaPredicted RBP13.46□□□□□ -0.25
SNX12-202ENST00000374274 HPRP00739 348 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ZNF484Q5JVG2 852 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 CNSTQ6PJW8 725 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 THAP5Q7Z6K1 395 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 ZNF567Q8N184 647 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 OR52K1Q8NGK4 314 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 FAM110BQ8TC76 370 aa13.46□□□□□ -0.25
SNX12-202ENST00000374274 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms