RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 RALGPS1Q5JS13 557 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 CDCP2Q5VXM1 449 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 CPNE8Q86YQ8 564 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 NSMCE1Q8WV22 266 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 CTNNBL1Q8WYA6 563 aaPredicted RBP21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 BOCQ9BWV1 1114 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 SCUBE2Q9NQ36 999 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 RALYQ9UKM9 306 aaKnown RBP21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 PCDHGC4Q9Y5F7 938 aa21.81■■□□□ 1.08
CCDC28B-201ENST00000373602 A0A1W2PQ67 120 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 RECQL5O94762 991 aaPredicted RBP21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 PCCBP05166 539 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 ELFN1P0C7U0 828 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 TSHRP16473 764 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 HTR1BP28222 390 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 MMP13P45452 471 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 HK3P52790 923 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 MARC1Q5VT66 337 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 VSTM4Q8IW00 320 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 IFI44Q8TCB0 444 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 CLPBQ9H078 707 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 TSPY26PQ9H489 355 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 NOD2Q9HC29 1040 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 LCMT1Q9UIC8 334 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 OR1A2Q9Y585 309 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 DMXL2Q8TDJ6 3036 aa21.8■■□□□ 1.08
CCDC28B-201ENST00000373602 ZZEF1O43149 2961 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 CFAP47Q6ZTR5 3102 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ANXA6P08133 673 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 GM2AP17900 193 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 TAS2R40P59535 323 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 PAFAH1B3Q15102 231 aaKnown RBP21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 CDKN3Q16667 212 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ALG11Q2TAA5 492 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ENPP7Q6UWV6 458 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 HID1Q8IV36 788 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 FSTL5Q8N475 847 aaPredicted RBP21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 TEX26Q8N6G2 289 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 PLA2G15Q8NCC3 412 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ATL2Q8NHH9 583 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 PCDH19Q8TAB3 1148 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 TSACCQ96A04 125 aaPredicted RBP21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ZNF670Q9BS34 389 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 B4GALT6Q9UBX8 382 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 LHX6Q9UPM6 363 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 AK5Q9Y6K8 562 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 CHD6Q8TD26 2715 aa21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 ANKRD11Q6UB99 2663 aaPredicted RBP21.79■■□□□ 1.08
CCDC28B-201ENST00000373602 FREM2Q5SZK8 3169 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 EME2A4GXA9 379 aaPredicted RBP21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 YY2O15391 372 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 MFSD11O43934 449 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 RASGRP1O95267 797 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 TMEM253P0C7T8 217 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 GJC1P36383 396 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 MAXP61244 160 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 GALNT2Q10471 571 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 TRAF2Q12933 501 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 PDK2Q15119 407 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 NR0B2Q15466 257 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 ANKRD20A8PQ5CZ79 823 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 C6orf132Q5T0Z8 1188 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 NCBP2-AS2Q69YL0 99 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 GUSBP11Q6P575 273 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 KCTD6Q8NC69 237 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 WDR92Q96MX6 357 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 DEF6Q9H4E7 631 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 ZNHIT6Q9NWK9 470 aaKnown RBP21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 PHTF1Q9UMS5 762 aa21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 URB1O60287 2271 aaKnown RBP21.78■■□□□ 1.08
CCDC28B-201ENST00000373602 FAM208BQ5VWN6 2430 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 CPED1A4D0V7 1026 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 A8MX80 341 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 AKR1B10O60218 316 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 CPP00450 1065 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 CELA2BP08218 269 aaPredicted RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 KRT7P08729 469 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 MAN1A1P33908 653 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 GARSP41250 739 aaKnown RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 KIAA1024LP59773 190 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 SRP54P61011 504 aaKnown RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 ELOCQ15369 112 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 TSR1Q2NL82 804 aaKnown RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 C19orf48Q6RUI8 117 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 NYAP1Q6ZVC0 841 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 EFL1Q7Z2Z2 1120 aaKnown RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 SLC35F3Q8IY50 421 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 MAPK15Q8TD08 544 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 PDCD6IPQ8WUM4 868 aaKnown RBP21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 GLMNQ92990 594 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 FAF2Q96CS3 445 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 COQ10AQ96MF6 247 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 DEPDC7Q96QD5 511 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 ABCG4Q9H172 646 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 ABHD10Q9NUJ1 306 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 KLQ9UEF7 1012 aa21.77■■□□□ 1.08
CCDC28B-201ENST00000373602 SHROOM3Q8TF72 1996 aa21.76■■□□□ 1.07
CCDC28B-201ENST00000373602 A0A087WV48 116 aa21.76■■□□□ 1.07
CCDC28B-201ENST00000373602 MFAP3LO75121 409 aa21.76■■□□□ 1.07
CCDC28B-201ENST00000373602 PGLSO95336 258 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms