RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 CIDEBQ9UHD4 219 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PNMA8BQ9ULN7 279 aaPredicted RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SNRPB2P08579 225 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PSMA4P25789 261 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 EEF1DP29692 281 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 RANBP1P43487 201 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PHEXP78562 749 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 LRRC23Q53EV4 343 aaPredicted RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ZYG11AQ6WRX3 759 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 TTC9BQ8N6N2 239 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CATSPER1Q8NEC5 780 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CCSER2Q9H7U1 834 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DNAJB4Q9UDY4 337 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CORO1CQ9ULV4 474 aaPredicted RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GABRQQ9UN88 632 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 HS3ST4Q9Y661 456 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 IPO13O94829 963 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ARSAP15289 507 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 TIGD2Q4W5G0 525 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SLC22A9Q8IVM8 553 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 TTC30BQ8N4P2 665 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ANKLE1Q8NAG6 615 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SIKE1Q9BRV8 207 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 NOL11Q9H8H0 719 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SH3BP1Q9Y3L3 701 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 AP4B1Q9Y6B7 739 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GSTT1P30711 240 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GTF2H3Q13889 308 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PAFAH1B3Q15102 231 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ATP6AP1LQ52LC2 224 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 IL27RAQ6UWB1 636 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 RP9Q8TA86 221 aaKnown RBP17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ARNTL2Q8WYA1 636 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SNX19Q92543 992 aa17.75■□□□□ 0.43
TRAF3IP1-201ENST00000373327 TMEM114B3SHH9 223 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 MYL4P12829 197 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CCNCP24863 283 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 HOXD10P28358 340 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GSSP48637 474 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 UBXN11Q5T124 520 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DET1Q7L5Y6 550 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CEP97Q8IW35 865 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CNTD1Q8N815 330 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SNRNP27Q8WVK2 155 aaKnown RBP17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 FAXDC2Q96IV6 333 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SYTL2Q9HCH5 934 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GTF2IRD1Q9UHL9 959 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SCN1AP35498 2009 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 HAPLN1P10915 354 aaPredicted RBP17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ECT2LQ008S8 904 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 BRMS1LQ5PSV4 323 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ZNF534Q76KX8 674 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SHKBP1Q8TBC3 707 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 FIG4Q92562 907 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 WNK3Q9BYP7 1800 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 A0A087X1B8 175 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DCLK1O15075 740 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 KPNA6O60684 536 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ATP6V1B2P21281 511 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 RTL3Q8N8U3 475 aaKnown RBP17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GFM2Q969S9 779 aaKnown RBP17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 MPP4Q96JB8 637 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SLC9A7Q96T83 725 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 OXSMQ9NWU1 459 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 EURLQ9NYK6 297 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 MOSPD1Q9UJG1 213 aa17.74■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GOT2P00505 430 aaKnown RBP17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 VCLP18206 1134 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CD68P34810 354 aaPredicted RBP17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CLCN5P51795 746 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 BOP1Q14137 746 aaKnown RBP17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ZNF789Q5FWF6 425 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 ZMIZ2Q8NF64 920 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 OR4L1Q8NH43 312 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 FAR2Q96K12 515 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 KANSL1LA0AUZ9 987 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 NPEPPSL1A6NEC2 478 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PBLDP30039 288 aaPredicted RBP17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GGT5P36269 586 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DLG1Q12959 904 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 FBXL22Q6P050 247 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 FAM151BQ6UXP7 276 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 CLHC1Q8NHS4 586 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 LPGAT1Q92604 370 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PPP1R2P1Q96PQ5 205 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 GPR21Q99679 349 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SH3GL3Q99963 347 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SLC25A23Q9BV35 468 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 DNAJC28Q9NX36 388 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 SEPT3Q9UH03 358 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 PTGDR2Q9Y5Y4 395 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 LRRC14BA6NHZ5 514 aa17.73■□□□□ 0.43
TRAF3IP1-201ENST00000373327 LRRC73Q5JTD7 316 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms