RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PCDHGC4Q9Y5F7 938 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 BUD23O43709 281 aaKnown RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 DDX6P26196 483 aaKnown RBP eCLIP25.09■■□□□ 1.614e-8■■■□□ 17.6
CTSA-203ENST00000372459 CCR2P41597 374 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 ZNF460Q14592 562 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 TAF1AQ15573 450 aaPredicted RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 TSNAXIP1Q2TAA8 658 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 WLSQ5T9L3 541 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 MRNIPQ6NTE8 343 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 RETSATQ6NUM9 610 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 TPGS1Q6ZTW0 290 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 GLT6D1Q7Z4J2 308 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 MTDHQ86UE4 582 aaKnown RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 CENPLQ8N0S6 344 aaPredicted RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 GPR150Q8NGU9 434 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 TSPAN17Q96FV3 270 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 SCYL1Q96KG9 808 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 FCF1Q9Y324 198 aaKnown RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 OR51F1A6NGY5 319 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 ITM2AO43736 263 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 H2AFYO75367 372 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 ATP6V1G2O95670 118 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 S1PR4O95977 384 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 PDHA1P08559 390 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 HSPA1AP0DMV8 641 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 HSPA1BP0DMV9 641 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 KITP10721 976 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 PGGT1BP53609 377 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 EPHA5P54756 1037 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 RBM20Q5T481 1227 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 GPR158Q5T848 1215 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 OR6Y1Q8NGX8 325 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 SHKBP1Q8TBC3 707 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 SIKE1Q9BRV8 207 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 TACO1Q9BSH4 297 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 MTIF3Q9H2K0 278 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 SUDS3Q9H7L9 328 aaPredicted RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 YY1AP1Q9H869 796 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 TXLNGQ9NUQ3 528 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 NLE1Q9NVX2 485 aaPredicted RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 KIAA1522Q9P206 1035 aaPredicted RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 MARCH4Q9P2E8 410 aaPredicted RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 CPSF2Q9P2I0 782 aaKnown RBP25.08■■□□□ 1.61
CTSA-203ENST00000372459 SPO11Q9Y5K1 396 aa25.08■■□□□ 1.61
CTSA-203ENST00000372459 LINC01553A4QN01 128 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 CD3EAPO15446 510 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 ATP5HO75947 161 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 KLHL2O95198 593 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 PTPN2P17706 415 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 ZNF140P52738 457 aaPredicted RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 ABCE1P61221 599 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 PTPRCAPQ14761 206 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 LRRC8EQ6NSJ5 796 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 WDR75Q8IWA0 830 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 APCDD1Q8J025 514 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 OR4L1Q8NH43 312 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 PIWIL2Q8TC59 973 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 ACDQ96AP0 544 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 NDNQ99608 321 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 C17orf80Q9BSJ5 609 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 SMG9Q9H0W8 520 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 MAN1C1Q9NR34 630 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 PLK2Q9NYY3 685 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 MARCOQ9UEW3 520 aaPredicted RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 CCDC162PA2VCL2 907 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 C2orf81A6NN90 581 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 TRIM13O60858 407 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 DNAJC6O75061 913 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 LYPLA1O75608 230 aaPredicted RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 UNC5CO95185 931 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 CYBBP04839 570 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 NQO1P15559 274 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 KPNA2P52292 529 aaKnown RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 ZYG11AQ6WRX3 759 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 TBC1D1Q86TI0 1168 aaPredicted RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 FSTL5Q8N475 847 aaPredicted RBP25.07■■□□□ 1.6
CTSA-203ENST00000372459 FIBINQ8TAL6 211 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 SH3RF2Q8TEC5 729 aa25.07■■□□□ 1.6
CTSA-203ENST00000372459 ANKRD66B4E2M5 251 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 GLRBP48167 497 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 ZBTB16Q05516 673 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 TRAF2Q12933 501 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 ARHGAP15Q53QZ3 475 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 HECTD2Q5U5R9 776 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 LDB1Q86U70 411 aaPredicted RBP25.06■■□□□ 1.6
CTSA-203ENST00000372459 TMEM151AQ8N4L1 468 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 MDGA1Q8NFP4 955 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 TTC8Q8TAM2 541 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 PDCD6IPQ8WUM4 868 aaKnown RBP25.06■■□□□ 1.6
CTSA-203ENST00000372459 NXNL1Q96CM4 212 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 CDKN2AIPNLQ96HQ2 116 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 WWP1Q9H0M0 922 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 CATSPERZQ9NTU4 200 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 OXSMQ9NWU1 459 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 DNAJC16Q9Y2G8 782 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 VWA7Q9Y334 891 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 BPTFQ12830 3046 aa25.06■■□□□ 1.6
CTSA-203ENST00000372459 TK2O00142 265 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 RFPL2O75678 378 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SYN1P17600 705 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms