RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 LACTB2Q53H82 288 aaPredicted RBP15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 HDAC7Q8WUI4 952 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 ARL5AQ9Y689 179 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 FAM86B1E9PN63 330 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 EIF5AP63241 154 aaKnown RBP15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 SMARCB1Q12824 385 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC41A1Q8IVJ1 513 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC44A5Q8NCS7 719 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 ADGRE2Q9UHX3 823 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 VPS51Q9UID3 782 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 TPH1P17752 444 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 EMC2Q15006 297 aa15.36■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC2A2P11168 524 aaPredicted RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 ST3GAL1Q11201 340 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 GALNT12Q8IXK2 581 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 SAE1Q9UBE0 346 aaPredicted RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 PCDHA11Q9Y5I1 949 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 NCAM2O15394 837 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 MTA2O94776 668 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 MUTP22033 750 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RBM34P42696 430 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 SRSF11Q05519 484 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 PER2O15055 1255 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 TSPAN3O60637 253 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 ODC1P11926 461 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF607Q96SK3 696 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 NDUFAF4Q9P032 175 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 KCNK1O00180 336 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 C2CD2LO14523 706 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC25A25Q6KCM7 469 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 C16orf46Q6P387 395 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 GHDCQ8N2G8 530 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RCN3Q96D15 328 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 GTPBP2Q9BX10 602 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 NEUROD4Q9HD90 331 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 KLQ9UEF7 1012 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RLN2P04090 185 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 SNRPFP62306 86 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 CDH17Q12864 832 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 TSEN2Q8NCE0 465 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 OR52K1Q8NGK4 314 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 CLPTM1LQ96KA5 538 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 EVPLQ92817 2033 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 EML1O00423 815 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 CRKLP46109 303 aaKnown RBP15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 S100A10P60903 97 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 QRICH1Q2TAL8 776 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RTKNQ9BST9 563 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 MTMR12Q9C0I1 747 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RNF146Q9NTX7 359 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 ARL15Q9NXU5 204 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 NINJ2Q9NZG7 142 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 RAB21Q9UL25 225 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 SNX6Q9UNH7 406 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 ICE1Q9Y2F5 2266 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 LRATO95237 230 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 MAGEA11P43364 429 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 MC1RQ01726 317 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 FOXRED2Q8IWF2 684 aa15.35■□□□□ 0.05
GTF3C4-201ENST00000372146 TVP23AA6NH52 213 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 OGTO15294 1046 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 PRAMEF1O95521 474 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 FTH1P02794 183 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 KLHDC10Q6PID8 442 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 CFAP97Q9P2B7 532 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TBC1D14Q9P2M4 693 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 IDO1P14902 403 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 RAB5BP61020 215 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 PDIA6Q15084 440 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNHIT3Q15649 155 aaPredicted RBP15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 BRMS1LQ5PSV4 323 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 CCDC107Q8WV48 283 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF700Q9H0M5 742 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 NUDT15Q9NV35 164 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TMED5Q9Y3A6 229 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 E9PAM4 449 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 CLPXO76031 633 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF782Q6ZMW2 699 aaPredicted RBP15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 RAB2BQ8WUD1 216 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TNFRSF25Q93038 417 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TBC1D17Q9HA65 648 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 RPTORQ8N122 1335 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 PDLIM1O00151 329 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 PNMA5Q96PV4 448 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 VAT1Q99536 393 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 PLEKHA1Q9HB21 404 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TAS2R7Q9NYW3 318 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 CSN2P05814 226 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 NUDT7P0C024 238 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 TSPAN5P62079 268 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 JAZF1Q86VZ6 243 aa15.34■□□□□ 0.05
GTF3C4-201ENST00000372146 SNIP1Q8TAD8 396 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms