RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ULK1O75385 1050 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 CST3P01034 146 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 KRT78Q8N1N4 520 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 TMEM86AQ8N2M4 240 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 UXS1Q8NBZ7 420 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 OR2T12Q8NG77 320 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 DCAKDQ8WVC6 231 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 GLIS2Q9BZE0 524 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 RPRD1BQ9NQG5 326 aaKnown RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ADGRE2Q9UHX3 823 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 TK2O00142 265 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 MFSD11O43934 449 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 MAGP20916 626 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 KCTD8Q6ZWB6 473 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 VPS35Q96QK1 796 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 GATA5Q9BWX5 397 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 ARIH1Q9Y4X5 557 aaPredicted RBP15.98■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 NFAT5O94916 1531 aa15.98■□□□□ 0.15
COL17A1-202ENST00000369733 TMCC2O75069 709 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 TMEM63AO94886 807 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 MRPS5P82675 430 aaKnown RBP15.97■□□□□ 0.15
COL17A1-202ENST00000369733 LEMD2Q8NC56 503 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 ADI1Q9BV57 179 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PRKAG2Q9UGJ0 569 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHAC2Q9Y5I4 1007 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 U3KQV3 271 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SLC28A1O00337 649 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 GCATO75600 419 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 OR56A5P0C7T3 313 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CSH1P0DML2 217 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CSH2P0DML3 217 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 THRBP10828 461 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 TYMPP19971 482 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PAICSP22234 425 aaKnown RBP15.97■□□□□ 0.15
COL17A1-202ENST00000369733 GJA8P48165 433 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CSNK2BP67870 215 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 GRM3Q14832 879 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 MZT2AQ6P582 158 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 AFTPHQ6ULP2 937 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SPATA19Q7Z5L4 167 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 HDAC10Q969S8 669 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CHRAC1Q9NRG0 131 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 GIN1Q9NXP7 522 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHB5Q9Y5E4 795 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PRR23AA6NEV1 266 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PSMD11O00231 422 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CCNKO75909 580 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PTPRNQ16849 979 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 AHI1Q8N157 1196 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 PANX3Q96QZ0 392 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 MRPL45Q9BRJ2 306 aaKnown RBP15.97■□□□□ 0.15
COL17A1-202ENST00000369733 MUC13Q9H3R2 512 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 KLHL28Q9NXS3 571 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SLC25A13Q9UJS0 675 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SNX6Q9UNH7 406 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 RFX3P48380 749 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 ATP6V0D1P61421 351 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SLC25A52Q3SY17 297 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 ZNF280DQ6N043 979 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 CDC73Q6P1J9 531 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 SLC26A9Q7LBE3 791 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 AHSPQ9NZD4 102 aa15.97■□□□□ 0.15
COL17A1-202ENST00000369733 UGT2B11O75310 529 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 NR4A1P22736 598 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 SRP54P61011 504 aaKnown RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 ERGIC3Q9Y282 383 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 POLR3HQ9Y535 204 aaPredicted RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 UGT1A9O60656 530 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 SEPHS1P49903 392 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 INTS11Q5TA45 600 aaKnown RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 FSTL4Q6MZW2 842 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 UGT1A7Q9HAW7 530 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 UGT1A10Q9HAW8 530 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 UGT1A8Q9HAW9 530 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 DNAAF2Q9NVR5 837 aaKnown RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 LOC110117498-PIK3R3F6TDL0 507 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 OTCP00480 354 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 MT-ND1P03886 318 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 CXCL9Q07325 125 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 SEMA5AQ13591 1074 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 CCNYL2Q5T2Q4 361 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 ERAP2Q6P179 960 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 TRMT10BQ6PF06 316 aaKnown RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 LCLAT1Q6UWP7 414 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 STRADAQ7RTN6 431 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 C10orf53Q8N6V4 93 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 NELL1Q92832 810 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 C18orf25Q96B23 403 aaPredicted RBP15.96■□□□□ 0.15
COL17A1-202ENST00000369733 HES2Q9Y543 173 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 DLG5Q8TDM6 1919 aa15.96■□□□□ 0.15
COL17A1-202ENST00000369733 SPATA31C2B4DYI2 1134 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 LGALS2P05162 132 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 ANXA5P08758 320 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 KLRC2P26717 231 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 GRK3P35626 688 aa15.96■□□□□ 0.14
COL17A1-202ENST00000369733 CARTPTQ16568 116 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms