RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 FTSJ1Q9UET6 329 aa20.65■□□□□ 0.9
SMNDC1-201ENST00000369592 COQ6Q9Y2Z9 468 aa20.65■□□□□ 0.9
SMNDC1-201ENST00000369592 SOWAHDA6NJG2 315 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 SDC3O75056 442 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 NDUFA10O95299 355 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PGLSO95336 258 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 MX2P20592 715 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PPIDQ08752 370 aaKnown RBP20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PDE1CQ14123 709 aaPredicted RBP20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 LRRC14Q15048 493 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 CFAP58Q5T655 872 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 TIGD7Q6NT04 549 aaPredicted RBP20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 RAD9BQ6WBX8 426 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PARGQ86W56 976 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 TMEM139Q8IV31 216 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 ARRDC2Q8TBH0 407 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PIH1D2Q8WWB5 315 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 CNDP2Q96KP4 475 aaKnown RBP20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 OLFM3Q96PB7 478 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 MCCC1Q96RQ3 725 aaPredicted RBP20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 NT5MQ9NPB1 228 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 PCDHGA1Q9Y5H4 931 aa20.64■□□□□ 0.89
SMNDC1-201ENST00000369592 ASXL3Q9C0F0 2248 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 ENC1O14682 589 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 LDOC1O95751 146 aaPredicted RBP20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 CCNB1P14635 433 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 CYLC1P35663 651 aaPredicted RBP20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 CDKN2BP42772 138 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 ACADVLP49748 655 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 PEX5P50542 639 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 ZNF211Q13398 564 aaPredicted RBP20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 MFSD7Q6UXD7 560 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 TMPRSS7Q7RTY8 843 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 OR4C6Q8NH72 309 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 LRRN4Q8WUT4 740 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 COQ10AQ96MF6 247 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 IL12RB2Q99665 862 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 SEMA3CQ99985 751 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 GOLPH3Q9H4A6 298 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 DDX56Q9NY93 547 aaKnown RBP20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 B4GALT6Q9UBX8 382 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 PHTF1Q9UMS5 762 aa20.63■□□□□ 0.89
SMNDC1-201ENST00000369592 PSTPIP1O43586 416 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 PRLP01236 227 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 CAPNS1P04632 268 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 CES1P23141 567 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 HNRNPKP61978 463 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 IFI35P80217 286 aaPredicted RBP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 NIPAL4Q0D2K0 466 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 SMAD1Q15797 465 aaKnown RBP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 ZNF542PQ5EBM4 170 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 C11orf63Q6NUN7 778 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 CCNI2Q6ZMN8 369 aaPredicted RBP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 MACC1Q6ZN28 852 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 CNTD1Q8N815 330 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 SCRN2Q96FV2 425 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 TBATAQ96M53 351 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 LGMNQ99538 433 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 POLR1EQ9GZS1 481 aaKnown RBP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 RBM22Q9NW64 420 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 DNAJC28Q9NX36 388 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 CSNK1G3Q9Y6M4 447 aa20.62■□□□□ 0.89
SMNDC1-201ENST00000369592 LY6G6EA0A0G2JKS1 128 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 BTNL10A8MVZ5 291 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 SCAMP1O15126 338 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 SIGLEC6O43699 453 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 RECQL5O94762 991 aaPredicted RBP20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 CPP00450 1065 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 KRT1P04264 644 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 HLA-DQB2P05538 268 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 PDHA1P08559 390 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 C1SP09871 688 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 LHCGRP22888 699 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 CDC25BP30305 580 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 TRIM23P36406 574 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 DSC2Q02487 901 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 DNAJC3Q13217 504 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 MTM1Q13496 603 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 SPA17Q15506 151 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 CCDC13Q8IYE1 715 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 FAM181AQ8N9Y4 354 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 ZNF548Q8NEK5 533 aaPredicted RBP20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 TPCN2Q8NHX9 752 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 RNF25Q96BH1 459 aaPredicted RBP20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 RAI2Q9Y5P3 530 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 U3KQA8 63 aa20.61■□□□□ 0.89
SMNDC1-201ENST00000369592 APOL1O14791 398 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 SPOPO43791 374 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 HEXIM1O94992 359 aaKnown RBP20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 MMP2P08253 660 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 ZFXP17010 805 aaPredicted RBP20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 CKMT2P17540 419 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 ACP1P24666 158 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 VIPR1P32241 457 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 NOP2P46087 812 aaKnown RBP20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 PTK2BQ14289 1009 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 INPP5AQ14642 412 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 PTPRRQ15256 657 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 CNGA3Q16281 694 aa20.6■□□□□ 0.89
SMNDC1-201ENST00000369592 NPNTQ6UXI9 565 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms