RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZNF844Q08AG5 666 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 AP1B1Q10567 949 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 MPP3Q13368 585 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PRPSAP1Q14558 356 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 TRIP13Q15645 432 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 OCLNQ16625 522 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 MPPE1Q53F39 396 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ALFQ53S48 1182 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 TRIM61Q5EBN2 209 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 EOGTQ5NDL2 527 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 FYB2Q5VWT5 728 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 EGFLAMQ63HQ2 1017 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 RAP1GAP2Q684P5 730 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 NAPEPLDQ6IQ20 393 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 KIAA1211LQ6NV74 962 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ZNF534Q76KX8 674 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PID1Q7Z2X4 250 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 CAND1Q86VP6 1230 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ZNF513Q8N8E2 541 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 DEFB124Q8NES8 71 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 OR2I1PQ8NGU4 316 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ARHGEF2Q92974 986 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 MRRFQ96E11 262 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 RPRD1AQ96P16 312 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 PSKH2Q96QS6 385 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 RUFY1Q96T51 708 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ARHGAP9Q9BRR9 750 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 DHRS4Q9BTZ2 278 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 BBS2Q9BXC9 721 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ACSS3Q9H6R3 686 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 LRRC40Q9H9A6 602 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 LRRC4CQ9HCJ2 640 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 TMEM9BQ9NQ34 198 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 CASS4Q9NQ75 786 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PLK2Q9NYY3 685 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 DEC1Q9P2X7 70 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 LGALS13Q9UHV8 139 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 SLC24A2Q9UI40 661 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PLAAQ9Y263 795 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 MFHAS1Q9Y4C4 1052 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PLXNB3Q9ULL4 1909 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PLXNA2O75051 1894 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 TYW5A2RUC4 315 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 GOLGA6L10A6NI86 522 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SDR42E2A6NKP2 422 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SRRM3A6NNA2 597 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 CNTN5O94779 1100 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MOCS2O96007 188 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 AGTP01019 485 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 C1QAP02745 245 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CFIP05156 583 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 APRTP07741 180 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 C1QTNF9P0C862 333 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MYZAPP0CAP1 466 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 HOXB2P14652 356 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ZNF16P17020 682 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 GABRG2P18507 467 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 PRKCHP24723 683 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 PSMA3P25788 255 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 HOXD9P28356 352 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 ATP5DP30049 168 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 OR1E1P30953 314 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CSNK1DP48730 415 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 VPS41P49754 854 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 GEMIN4P57678 1058 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 GNA12Q03113 381 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 NSUN2Q08J23 767 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNX27-201ENST00000368838 PDIA2Q13087 525 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 ZBTB17Q13105 803 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 NAB1Q13506 487 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 POLD3Q15054 466 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 KYNUQ16719 465 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SWI5Q1ZZU3 235 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MAP7D1Q3KQU3 841 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MARC1Q5VT66 337 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ANKRD22Q5VYY1 191 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 STEAP4Q687X5 459 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 GRAMD4Q6IC98 578 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CXorf57Q6NSI4 855 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 RANBP10Q6VN20 620 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 LPCAT2Q7L5N7 544 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 TMEM135Q86UB9 458 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 DENND1CQ8IV53 801 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ETFBKMTQ8IXQ9 262 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 BBS5Q8N3I7 341 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 FIBINQ8TAL6 211 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 PYROXD1Q8WU10 500 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 NSMCE1Q8WV22 266 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SCG3Q8WXD2 468 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 TTC17Q96AE7 1141 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 TLCD1Q96CP7 247 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms