RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 GNL1P36915 607 aaPredicted RBP17.51■□□□□ 0.39
CHTOP-203ENST00000368690 BCAT1P54687 386 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 INTS6LQ5JSJ4 861 aaKnown RBP17.51■□□□□ 0.39
CHTOP-203ENST00000368690 CCNYL2Q5T2Q4 361 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 SLC15A3Q8IY34 581 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 SCAIQ8N9R8 606 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 NXNL1Q96CM4 212 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 MYRFLQ96LU7 910 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 VAT1Q99536 393 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 MLPHQ9BV36 600 aaPredicted RBP17.51■□□□□ 0.39
CHTOP-203ENST00000368690 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 OSBPL2Q9H1P3 480 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 POMKQ9H5K3 350 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 MAGEE1Q9HCI5 957 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 TBC1D13Q9NVG8 400 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 ATAD3AQ9NVI7 634 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 ACTR3BQ9P1U1 418 aa17.51■□□□□ 0.39
CHTOP-203ENST00000368690 KIAA1522Q9P206 1035 aaPredicted RBP17.51■□□□□ 0.39
CHTOP-203ENST00000368690 TTC24A2A3L6 582 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 KPNA4O00629 521 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 PSMD3O43242 534 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 XPOTO43592 962 aaKnown RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 PGK1P00558 417 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 F7P08709 466 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 NMBRP28336 390 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 ADCYAP1R1P41586 468 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TMEM53Q6P2H8 277 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 C17orf99Q6UX52 265 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 BNIPLQ7Z465 357 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 SLC41A1Q8IVJ1 513 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 CPNE9Q8IYJ1 553 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 LEMD2Q8NC56 503 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.5■□□□□ 0.398e-6■■□□□ 11.8
CHTOP-203ENST00000368690 HSFY1Q96LI6 401 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 MUC3BQ9H195 1237 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 MINDY3Q9H8M7 445 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 VTA1Q9NP79 307 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 SMPD3Q9NY59 655 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 ZSWIM8A7E2V4 1837 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 CLPXO76031 633 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 SEC14L2O76054 403 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 BCL10O95999 233 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 AHSGP02765 367 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TMED10P49755 219 aaKnown RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 CDH17Q12864 832 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 SNX17Q15036 470 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 EGFLAMQ63HQ2 1017 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 NAPEPLDQ6IQ20 393 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF773Q6PK81 442 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 FAM131BQ86XD5 332 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 IFNLR1Q8IU57 520 aaPredicted RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 KLHDC8BQ8IXV7 354 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 MINDY1Q8N5J2 469 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 SLC15A4Q8N697 577 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 MINDY2Q8NBR6 621 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TRPV3Q8NET8 790 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 RAB2BQ8WUD1 216 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 GPR20Q99678 358 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 MRPL45Q9BRJ2 306 aaKnown RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TRNAU1APQ9NX07 287 aaKnown RBP17.5■□□□□ 0.39
CHTOP-203ENST00000368690 NDUFAF1Q9Y375 327 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 TRIM17Q9Y577 477 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
CHTOP-203ENST00000368690 H0YAE9 185 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 KCNK1O00180 336 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 SNAI1O95863 264 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 IQCF3P0C7M6 154 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 MAP4P27816 1152 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 CYBRD1Q53TN4 286 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 TAPT1Q6NXT6 567 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 CYGBQ8WWM9 190 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 ZNF638Q14966 1978 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 ZBTB24O43167 697 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 AOC2O75106 756 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 DAB1O75553 588 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 HDCP19113 662 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 CD68P34810 354 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 NOS2P35228 1153 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 AVPR1AP37288 418 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 SULT1E1P49888 294 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 AIF1P55008 147 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 ATP1A4Q13733 1029 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 LINC00523Q86TU6 105 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 ADGRG5Q8IZF4 528 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 PAPD5Q8NDF8 572 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 NRBF2Q96F24 287 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 TRMOQ9BU70 441 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 YIPF2Q9BWQ6 316 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 NAA50Q9GZZ1 169 aaKnown RBP17.49■□□□□ 0.39
CHTOP-203ENST00000368690 PSME2Q9UL46 239 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 OAZ3Q9UMX2 235 aa17.49■□□□□ 0.39
CHTOP-203ENST00000368690 AURKCQ9UQB9 309 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms