RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 PHF21BQ96EK2 531 aa18.2■□□□□ 0.5
LMNA-207ENST00000368301 UBXN10Q96LJ8 280 aa18.2■□□□□ 0.5
LMNA-207ENST00000368301 TMEM175Q9BSA9 504 aa18.2■□□□□ 0.5
LMNA-207ENST00000368301 CDH22Q9UJ99 828 aa18.2■□□□□ 0.5
LMNA-207ENST00000368301 LAMA3Q16787 3333 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 ZNF840PA6NDX5 716 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 LTA4HP09960 611 aaKnown RBP18.19■□□□□ 0.5
LMNA-207ENST00000368301 TIAL1Q01085 375 aaKnown RBP eCLIP18.19■□□□□ 0.5
LMNA-207ENST00000368301 MUM1Q2TAK8 710 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 PGM2L1Q6PCE3 622 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 SNX32Q86XE0 403 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 HPS6Q86YV9 775 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 ACTRT2Q8TDY3 377 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 SCG3Q8WXD2 468 aaKnown RBP18.19■□□□□ 0.5
LMNA-207ENST00000368301 DNAJC9Q8WXX5 260 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 FEM1CQ96JP0 617 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 PPP1R12CQ9BZL4 782 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 UNC93B1Q9H1C4 597 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 GTSE1Q9NYZ3 720 aa18.19■□□□□ 0.5
LMNA-207ENST00000368301 TSPAN3O60637 253 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 WISP3O95389 354 aaPredicted RBP18.18■□□□□ 0.5
LMNA-207ENST00000368301 IRF1P10914 325 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 ANPEPP15144 967 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 GCKP35557 465 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 SLC14A2Q15849 920 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 SLC8B1Q6J4K2 584 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 KBTBD2Q8IY47 623 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 TRIB3Q96RU7 358 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 ZNF385DQ9H6B1 395 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 ALG9Q9H6U8 611 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 COMMD8Q9NX08 183 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 MTRRQ9UBK8 725 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 CDYLQ9Y232 598 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 SPO11Q9Y5K1 396 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 NPHS1O60500 1241 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 HMGA1P17096 107 aaKnown RBP18.18■□□□□ 0.5
LMNA-207ENST00000368301 TSPAN8P19075 237 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 BTKQ06187 659 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 SMARCB1Q12824 385 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 C5orf22Q49AR2 442 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 TCHHL1Q5QJ38 904 aaPredicted RBP18.18■□□□□ 0.5
LMNA-207ENST00000368301 C6orf163Q5TEZ5 329 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 AGAP9Q5VTM2 703 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 TTC1Q99614 292 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 CFHR5Q9BXR6 569 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 MRPL9Q9BYD2 267 aaKnown RBP18.18■□□□□ 0.5
LMNA-207ENST00000368301 NCKIPSDQ9NZQ3 722 aa18.18■□□□□ 0.5
LMNA-207ENST00000368301 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 AIM2O14862 343 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 CCNT2O60583 730 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 SKAP2O75563 359 aaPredicted RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 FGF1P05230 155 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 KPNA1P52294 538 aaPredicted RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 DNAJB13P59910 316 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 ACVR1Q04771 509 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 SULT2A1Q06520 285 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 TBL3Q12788 808 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 CCNIQ14094 377 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 ACAD11Q709F0 780 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 PIWIL4Q7Z3Z4 852 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 LRRC43Q8N309 656 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 C2orf15Q8WU43 125 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 PDCD6IPQ8WUM4 868 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 PYDC1Q8WXC3 89 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 RNF38Q9H0F5 515 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 PCDH10Q9P2E7 1040 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 SDHDO14521 159 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 CD3EAPO15446 510 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 HLA-DPA1P20036 260 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 ATP6V1C1P21283 382 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 PRDX6P30041 224 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 CORO1AP31146 461 aaKnown RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 PTPRRQ15256 657 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 TMCO2Q7Z6W1 182 aaPredicted RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 ZNF296Q8WUU4 475 aaPredicted RBP18.17■□□□□ 0.5
LMNA-207ENST00000368301 PTERQ96BW5 349 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 TSPAN17Q96FV3 270 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 MGME1Q9BQP7 344 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 CLSTN3Q9BQT9 956 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 RTKNQ9BST9 563 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 VTI1BQ9UEU0 232 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 ARHGAP26Q9UNA1 814 aa18.17■□□□□ 0.5
LMNA-207ENST00000368301 C2orf78A6NCI8 922 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 STC2O76061 302 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 IPO13O94829 963 aaKnown RBP18.16■□□□□ 0.5
LMNA-207ENST00000368301 BAG2O95816 211 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 EFEMP2O95967 443 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 SERPINF2P08697 491 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 ALDH7A1P49419 539 aaKnown RBP18.16■□□□□ 0.5
LMNA-207ENST00000368301 SCNN1BP51168 640 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 HIPK4Q8NE63 616 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 MAGEH1Q9H213 219 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 HOXA2O43364 376 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 RPP40O75818 363 aaKnown RBP18.16■□□□□ 0.5
LMNA-207ENST00000368301 GLP2RO95838 553 aa18.16■□□□□ 0.5
LMNA-207ENST00000368301 SP100P23497 879 aaPredicted RBP18.16■□□□□ 0.5
LMNA-207ENST00000368301 PPARGP37231 505 aaPredicted RBP18.16■□□□□ 0.5
LMNA-207ENST00000368301 SLC11A2P49281 568 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms