RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ATXN7L2Q5T6C5 722 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 THEMIS2Q5TEJ8 643 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ATG16L1Q676U5 607 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PDPK2PQ6A1A2 396 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ETFRF1Q6IPR1 90 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TCEAL6Q6IPX3 200 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 CAVIN1Q6NZI2 390 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 KLHDC10Q6PID8 442 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SYCE2Q6PIF2 218 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TRAT1Q6PIZ9 186 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ATF7IPQ6VMQ6 1270 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MSANTD1Q6ZTZ1 278 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MIER3Q7Z3K6 550 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 NLRX1Q86UT6 975 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ZSWIM9Q86XI8 627 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PALM2Q8IXS6 379 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SCML4Q8N228 414 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 BBS5Q8N3I7 341 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 IL31RAQ8NI17 732 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PIP4K2CQ8TBX8 421 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 BCAS4Q8TDM0 211 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PANK1Q8TE04 598 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 STYXQ8WUJ0 223 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TCEAL3Q969E4 200 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ALG14Q96F25 216 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MSANTD3Q96H12 275 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SUCLG2Q96I99 432 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TCEANC2Q96MN5 208 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNK16Q96T55 309 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 CCDC77Q9BR77 488 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SIKE1Q9BRV8 207 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 OSBPL10Q9BXB5 764 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PACSIN1Q9BY11 444 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ANKRD2Q9GZV1 360 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TWSG1Q9GZX9 223 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 AP5M1Q9H0R1 490 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC6A17Q9H1V8 727 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 KCNK13Q9HB14 408 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 HPS4Q9NQG7 708 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM114A2Q9NRY5 505 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 TMEM184CQ9NVA4 438 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MRPL15Q9P015 296 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 H2AFY2Q9P0M6 372 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 IMPACTQ9P2X3 320 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 MBD1Q9UIS9 605 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 BAG5Q9UL15 447 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SUFUQ9UMX1 484 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 INSL6Q9Y581 213 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 PCDHA8Q9Y5H6 950 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 SPO11Q9Y5K1 396 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 ATP6V1DQ9Y5K8 247 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 POMT1Q9Y6A1 747 aa3.59□□□□□ -1.83
ECHDC1-205ENST00000368295 LRBAP50851 2863 aa3.59□□□□□ -1.84
ECHDC1-205ENST00000368295 ROBO3Q96MS0 1386 aa3.59□□□□□ -1.84
ECHDC1-205ENST00000368295 EME2A4GXA9 379 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NCF1BA6NI72 391 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 OR6C65A6NJZ3 312 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NCF1CA8MVU1 366 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 GOLGA8SH3BPF8 625 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 STMND1H3BQB6 276 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 MYO1FO00160 1098 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PODXLO00592 558 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ABLIM1O14639 778 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC16A6O15403 523 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC28A2O43868 658 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CACNG3O60359 315 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CYTIPO60759 359 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 KCNJ13O60928 360 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 RECQL4O94761 1208 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SNAI1O95863 264 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 GALTP07902 379 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 RETP07949 1114 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 LINC00271P0C7V0 271 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TROVE2P10155 538 aaKnown RBP eCLIP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PTAFRP25105 342 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PRKAR2BP31323 418 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 MCM7P33993 719 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 TRHRP34981 398 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CAMLGP49069 296 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 DHPSP49366 369 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CCT8P50990 548 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 GTF2A1P52655 376 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 RWDD2BP57060 319 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC8A3P57103 927 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NKX3-2P78367 333 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 DR1Q01658 176 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 NPRL3Q12980 569 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CAPSQ13938 189 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 PDCD1Q15116 288 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SEC23BQ15437 767 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF124Q15973 351 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 FSCN1Q16658 493 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 MEP1BQ16820 701 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 INSCQ1MX18 579 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 KRT24Q2M2I5 525 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC14Q49A88 953 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 C9orf152Q5JTZ5 239 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 SPATA46Q5T0L3 261 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 MPP7Q5T2T1 576 aa3.58□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF648Q5T619 568 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms