RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 PPP4R4Q6NUP7 873 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 FSTL5Q8N475 847 aaPredicted RBP11.51□□□□□ -0.57
RD3-201ENST00000367002 FAM156AQ8NDB6 213 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
RD3-201ENST00000367002 TBATAQ96M53 351 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 CAMKK2Q96RR4 588 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 OSGEPL1Q9H4B0 414 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 DNAJC28Q9NX36 388 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 COX7A2P14406 83 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 SERPINA4P29622 427 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 IDH3AP50213 366 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 TAS2R39P59534 338 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 GPR158Q5T848 1215 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 ZNF614Q8N883 585 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 CCDC28BQ9BUN5 200 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 ZNF395Q9H8N7 513 aaPredicted RBP11.51□□□□□ -0.57
RD3-201ENST00000367002 AGO3Q9H9G7 860 aaKnown RBP11.51□□□□□ -0.57
RD3-201ENST00000367002 STK39Q9UEW8 545 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 AP3M1Q9Y2T2 418 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 FADS3Q9Y5Q0 445 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 SMIM35A0A1B0GVV1 85 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 CCL22O00626 93 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 SLC22A3O75751 556 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 FBXW4P57775 412 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 OGDHQ02218 1023 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 PLD1Q13393 1074 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 FGD3Q5JSP0 725 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 TPGS1Q6ZTW0 290 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 DENND1CQ8IV53 801 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 CNTD1Q8N815 330 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 PPM1MQ96MI6 270 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 HOPXQ9BPY8 73 aaPredicted RBP11.51□□□□□ -0.57
RD3-201ENST00000367002 GBA3Q9H227 469 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 CACNA2D2Q9NY47 1150 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 GIT1Q9Y2X7 761 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 ZNF541Q9H0D2 1346 aa11.51□□□□□ -0.57
RD3-201ENST00000367002 LOC100506127A0A0U1RQW1 187 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 C9JVG2 144 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 PRR23D1E9PI22 279 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 ADCY6O43306 1168 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CST1P01037 141 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CATP04040 527 aaKnown RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 PRR23D2P0DMB1 279 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 NMBRP28336 390 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CCNHP51946 323 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 SLC18A1P54219 525 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 ACTR3P61158 418 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 C6orf52Q5T4I8 152 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 RHBDF2Q6PJF5 856 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 ITIH5Q86UX2 942 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 ZC3H3Q8IXZ2 948 aaKnown RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 DCBLD1Q8N8Z6 715 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 LMO3Q8TAP4 145 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 RSPH1Q8WYR4 309 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 AHSPQ9NZD4 102 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 TIMM22Q9Y584 194 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 MYBPHLA2RUH7 354 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 MANSC4A6NHS7 340 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 PDZK1P1A8MUH7 402 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CXorf49A8MYA2 514 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 OTCP00480 354 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 ALOX12P18054 663 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 PTPN3P26045 913 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 L1CAMP32004 1257 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 GPX6P59796 221 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
RD3-201ENST00000367002 TUSC3Q13454 348 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 MSS51Q4VC12 460 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 CLEC6AQ6EIG7 209 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 DENND6AQ8IWF6 608 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 UNC5BQ8IZJ1 945 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 PGBD3Q8N328 593 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 DCAKDQ8WVC6 231 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 BTN2A2Q8WVV5 523 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 REXO4Q9GZR2 422 aaKnown RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 KLHL3Q9UH77 587 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 KPNA3O00505 521 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 TREHO43280 583 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 PIGRP01833 764 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 GRK3P35626 688 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 TRAF3Q13114 568 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 INO80DQ53TQ3 878 aaPredicted RBP11.5□□□□□ -0.57
RD3-201ENST00000367002 FBXO48Q5FWF7 155 aa11.5□□□□□ -0.57
RD3-201ENST00000367002 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms