RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IDH3AP50213 366 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 PHKG1Q16816 387 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SVOPLQ8N434 492 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 MRPL9Q9BYD2 267 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SDK1Q7Z5N4 2213 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 IL1BP01584 269 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 AKAP5P24588 427 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 GRK3P35626 688 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 GPR15P49685 360 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADGRG6Q86SQ4 1221 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 FANCEQ9HB96 536 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ATP13A1Q9HD20 1204 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 KLHL28Q9NXS3 571 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF112Q9UJU3 913 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ACADVLP49748 655 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 THAP5Q7Z6K1 395 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 GIPC3Q8TF64 312 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SAMD4AQ9UPU9 718 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC28A1O00337 649 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 MOGSQ13724 837 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 DDX39BQ13838 428 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 MRPS31Q92665 395 aaKnown RBP11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 PROX1Q92786 737 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 QSOX1O00391 747 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 STX11O75558 287 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 RPN2P04844 631 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 LPOP22079 712 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 WNT3AP56704 352 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 CRY1Q16526 586 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PAGE2BQ5JRK9 111 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 HIPK1Q86Z02 1210 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 LPCAT1Q8NF37 534 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 KLHL20Q9Y2M5 609 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 EFCAB10A6NFE3 127 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 IMPDH2P12268 514 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 MPSTP25325 297 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 GNA13Q14344 377 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ARMC12Q5T9G4 340 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 MPP5Q8N3R9 675 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TMEM159Q96B96 161 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 A0A0J9YYE9 177 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 AQP12BA6NM10 295 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TUBA4AP68366 448 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TLK2Q86UE8 772 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 AQP12AQ8IXF9 295 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 SERAC1Q96JX3 654 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 DGCR6LQ9BY27 220 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 GMPPBQ9Y5P6 360 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 HNRNPLP14866 589 aaKnown RBP eCLIP11.83□□□□□ -0.526e-7■■■■□ 24.4
CDC42BPA-202ENST00000366764 IL12RB1P42701 662 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 FOXD4Q12950 439 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ARHGAP36Q6ZRI8 547 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PRR23BQ6ZRT6 265 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 GPC2Q8N158 579 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 KCTD15Q96SI1 283 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TXLNGYQ9BZA5 131 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 CCDC88CQ9P219 2028 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 MYL12BO14950 172 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TUFMP49411 452 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PSEN2P49810 448 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 SREBF2Q12772 1141 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PARP15Q460N3 678 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 C12orf29Q8N999 325 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 QRFPRQ96P65 431 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 SEMA4BQ9NPR2 832 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 CNTN6Q9UQ52 1028 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 CCNCP24863 283 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ERICH5Q6P6B1 374 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 NELL1Q92832 810 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ARMC7Q9H6L4 198 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 SIRPGQ9P1W8 387 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 BMP10O95393 424 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ANXA5P08758 320 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 PRKCHP24723 683 aa11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 KLF1Q13351 362 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 ERI1Q8IV48 349 aaKnown RBP11.83□□□□□ -0.52
CDC42BPA-202ENST00000366764 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms