RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SRPRAP08240 638 aaKnown RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 CD38P28907 300 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 SERPINB6P35237 376 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 PLK1P53350 603 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 UCNP55089 124 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ST8SIA6P61647 398 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 GABREP78334 506 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ARF5P84085 180 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 GNA12Q03113 381 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 C2orf54Q08AI8 447 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 GALNT2Q10471 571 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ILKQ13418 452 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 TFDP2Q14188 446 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 COLEC12Q5KU26 742 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 RNF219Q5W0B1 726 aaPredicted RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 SETD3Q86TU7 594 aaPredicted RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ZC3H18Q86VM9 953 aaKnown RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 SPATS2Q86XZ4 545 aaKnown RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 PRELID2Q8N945 189 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 OR2T34Q8NGX1 318 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 KIF18AQ8NI77 898 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 GANCQ8TET4 914 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 UBE2Q2Q8WVN8 375 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ARHGEF2Q92974 986 aaKnown RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF578Q96N58 590 aaPredicted RBP8.28□□□□□ -1.08
MRPL55-211ENST00000366738 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 FZD4Q9ULV1 537 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 SCML1Q9UN30 329 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 NCKAP1Q9Y2A7 1128 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 EFR3BQ9Y2G0 817 aa8.28□□□□□ -1.08
MRPL55-211ENST00000366738 RELNP78509 3460 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ILVBLA1L0T0 632 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 J3KR12 359 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 LATO43561 262 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 LIASO43766 372 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 SDC3O75056 442 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CD160O95971 181 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 IL1BP01584 269 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 TUBB4AP04350 444 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ZFXP17010 805 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CKMT2P17540 419 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 C5AR1P21730 350 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CETN2P41208 172 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CCR5P51681 352 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 NDST2P52849 883 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 GDF10P55107 478 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 NXPH1P58417 271 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 TAS2R38P59533 333 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 NFKB2Q00653 900 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 VAC14Q08AM6 782 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 NFATC3Q12968 1075 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 SERINC3Q13530 473 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 SNX1Q13596 522 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 POLD3Q15054 466 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 PRKD1Q15139 912 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 POM121L1PQ3SYA9 428 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 PARP15Q460N3 678 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 DNTTIP2Q5QJE6 756 aaKnown RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 TTC27Q6P3X3 843 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 LINGO4Q6UY18 593 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 KANSL1Q7Z3B3 1105 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF354CQ86Y25 554 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ATPAF2Q8N5M1 289 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ZNF557Q8N988 423 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 DCAF4L2Q8NA75 395 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 LRRN4CLQ8ND94 238 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 OR14C36Q8NHC7 312 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 SLC35B2Q8TB61 432 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 P3H4Q92791 437 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 QKIQ96PU8 341 aaKnown RBP eCLIP8.27□□□□□ -1.09
MRPL55-211ENST00000366738 OMDQ99983 421 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 FEM1AQ9BSK4 669 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 PDFQ9HBH1 243 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 IL17BQ9UHF5 180 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 VPS51Q9UID3 782 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CDC23Q9UJX2 597 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 VPS28Q9UK41 221 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 DNPEPQ9ULA0 475 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CA5BQ9Y2D0 317 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 CENPEQ02224 2701 aa8.27□□□□□ -1.09
MRPL55-211ENST00000366738 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 LRRC72A6NJI9 287 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 K7ERQ8 282 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 KRIT1O00522 736 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 TRIM38O00635 465 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 YKT6O15498 198 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 SIGLEC6O43699 453 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 ATP9BO43861 1147 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 MAFKO60675 156 aa8.26□□□□□ -1.09
MRPL55-211ENST00000366738 RNASEH1O60930 286 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms