RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CHN2P52757 468 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ARFIP2P53365 341 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 AP3M2P53677 418 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SUMO3P55854 103 aaPredicted RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 ARPP19P56211 112 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 NTHL1P78549 312 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 MYO1EQ12965 1108 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 CNGA2Q16280 664 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SLC5A9Q2M3M2 681 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SOWAHAQ2M3V2 549 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ZACNQ401N2 412 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 INTS8Q75QN2 995 aaKnown RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 MTSS1LQ765P7 747 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 GET4Q7L5D6 327 aaPredicted RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 TRAPPC11Q7Z392 1133 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SUGP1Q8IWZ8 645 aaKnown RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 THEM5Q8N1Q8 247 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 TMEM105Q8N8V8 129 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ATAD1Q8NBU5 361 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ITFG1Q8TB96 612 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SLC35C1Q96A29 364 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 TNIP3Q96KP6 325 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 CNOT6LQ96LI5 555 aaKnown RBP8.17□□□□□ -1.1
YBX3-204ENST00000366290 PKMYT1Q99640 499 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ACBD6Q9BR61 282 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 THAP9Q9H5L6 903 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 SLC2A4RGQ9NR83 387 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 CPNE7Q9UBL6 633 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 CORO2BQ9UQ03 480 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 YIPF1Q9Y548 306 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 GREB1Q4ZG55 1949 aa8.17□□□□□ -1.1
YBX3-204ENST00000366290 FAM186AA6NE01 2351 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 RHPN2P1A8MT19 583 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 PROB1E7EW31 1015 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 IKBKBO14920 756 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 HUS1O60921 280 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 OBSL1O75147 1896 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 MOSPD3O75425 235 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 GNA14O95837 355 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TNNI1P19237 187 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 ACO1P21399 889 aaKnown RBP8.16□□□□□ -1.1
YBX3-204ENST00000366290 CCR2P41597 374 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TUFMP49411 452 aaKnown RBP8.16□□□□□ -1.1
YBX3-204ENST00000366290 FMO1Q01740 532 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 MYL5Q02045 173 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TWF1Q12792 350 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 ICAM4Q14773 271 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 SLC39A12Q504Y0 691 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 HSP90AA4PQ58FG1 418 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 FAM171BQ6P995 826 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 Q6ZRM9 215 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 ASCL5Q7RTU5 278 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 APTXQ7Z2E3 356 aaKnown RBP8.16□□□□□ -1.1
YBX3-204ENST00000366290 GVINP1Q7Z2Y8 2422 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TMC8Q8IU68 726 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 ELMOD1Q8N336 334 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TMIEQ8NEW7 156 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 SPPL2BQ8TCT7 592 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 NUP210Q8TEM1 1887 aaPredicted RBP8.16□□□□□ -1.1
YBX3-204ENST00000366290 FGF14Q92915 247 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 SCAMP4Q969E2 229 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 PSMG2Q969U7 264 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 HPDLQ96IR7 371 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 PGLYRP2Q96PD5 576 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 FNBP1Q96RU3 617 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 MNTQ99583 582 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 PRRX2Q99811 253 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 TRPV4Q9HBA0 871 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 WNT16Q9UBV4 365 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
YBX3-204ENST00000366290 SNX13Q9Y5W8 968 aa8.16□□□□□ -1.1
YBX3-204ENST00000366290 FRYLO94915 3013 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 TACC1O75410 805 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ECI2O75521 394 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 PRSS23O95084 383 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 FGFR1OPO95684 399 aaKnown RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 FGF19O95750 216 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 KRT19P08727 400 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 HAPLN1P10915 354 aaPredicted RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 ATP1A3P13637 1013 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 KRT13P13646 458 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 CEBPBP17676 345 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ATF6P18850 670 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 WARSP23381 471 aaKnown RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 FCARP24071 287 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ATICP31939 592 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 GCLMP48507 274 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 PRIM2P49643 509 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 ZNF135P52742 658 aaPredicted RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 TSPY1Q01534 308 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 HABP2Q14520 560 aaPredicted RBP8.15□□□□□ -1.1
YBX3-204ENST00000366290 CFAP221Q4G0U5 840 aa8.15□□□□□ -1.1
YBX3-204ENST00000366290 CCDC40Q4G0X9 1142 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms