RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NEPROQ6NW34 567 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 USP43Q70EL4 1123 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 NT5DC4Q86YG4 428 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 CMTR2Q8IYT2 770 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 COQ7Q99807 217 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 HGH1Q9BTY7 390 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 SMPD3Q9NY59 655 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 DSEQ9UL01 958 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 C2CD4BA6NLJ0 364 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 GNGT2O14610 69 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ANGPT2O15123 496 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 RAD51BO15315 384 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 HSPA1AP0DMV8 641 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 HSPA1BP0DMV9 641 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 VDRP11473 427 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ARL2P36404 184 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 RPS9P46781 194 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 LAMC2Q13753 1193 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 SURF1Q15526 300 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 PCSK7Q16549 785 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 FBXO48Q5FWF7 155 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 LIPMQ5VYY2 423 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ERMP1Q7Z2K6 904 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 TERB1Q8NA31 727 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF347Q96SE7 839 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 MRPL45Q9BRJ2 306 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 POMKQ9H5K3 350 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 LRRC4Q9HBW1 653 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 TBC1D13Q9NVG8 400 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 M0QYT0 321 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 PPEF2O14830 753 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 MAFGO15525 162 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 PSMB9P28065 219 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CAPGP40121 348 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF132P52740 706 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 VBP1P61758 197 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 GRM3Q14832 879 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CNTD1Q8N815 330 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 RDM1Q8NG50 284 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 P2RY11Q96G91 374 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 VPS39Q96JC1 886 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FUNDC2Q9BWH2 189 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 BBS2Q9BXC9 721 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 C6orf62Q9GZU0 229 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 XYLT2Q9H1B5 865 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 MFSD11O43934 449 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 HUS1O60921 280 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SEC24AO95486 1093 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 AKAP5P24588 427 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 AP3M2P53677 418 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 BCAT1P54687 386 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 PITX1P78337 314 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TRIM32Q13049 653 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 OXA1LQ15070 435 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 BCL2A1Q16548 175 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FAM83EQ2M2I3 478 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 ANKRD13BQ86YJ7 626 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 EPHX4Q8IUS5 362 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FSTL5Q8N475 847 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 IPMKQ8NFU5 416 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FIG4Q92562 907 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 C17orf80Q9BSJ5 609 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 OXSMQ9NWU1 459 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SUCOQ9UBS9 1254 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CPSF3Q9UKF6 684 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SNX10Q9Y5X0 201 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 DFFAO00273 331 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 BCAS1O75363 584 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CCNKO75909 580 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 JCHAINP01591 159 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 MYF6P23409 242 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 PLA2G16P53816 162 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 RPS3AP61247 264 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TNK2Q07912 1038 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 GRTP1Q5TC63 336 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 R3HCC1LQ7Z5L2 792 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SLC7A14Q8TBB6 771 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 SUN5Q8TC36 379 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TRPM4Q8TD43 1214 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 RAB2BQ8WUD1 216 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 NXNL1Q96CM4 212 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 TBCBQ99426 244 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 CPNE1Q99829 537 aa12.75□□□□□ -0.37
VAMP1-201ENST00000361716 REXO4Q9GZR2 422 aaKnown RBP12.75□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms