RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DCAF6Q58WW2 860 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 OVCH2Q7RTZ1 564 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 PLEKHH3Q7Z736 793 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 RNF139Q8WU17 664 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 NUDCD1Q96RS6 583 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 MMADHCQ9H3L0 296 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-202ENST00000360642 NMRK2Q9NPI5 230 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 EMCNQ9ULC0 261 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 ST14Q9Y5Y6 855 aa7.43□□□□□ -1.22
CLCN3-202ENST00000360642 RNF103O00237 685 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 DCLK1O15075 740 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 HUS1O60921 280 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 TOP3BO95985 862 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 FYNP06241 537 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PGAM1P18669 254 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GCKP35557 465 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 NDUFV1P49821 464 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CRADDP78560 199 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SMAD3P84022 425 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PURAQ00577 322 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ZBTB16Q05516 673 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 NAB1Q13506 487 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SMAD2Q15796 467 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 KHDC1Q4VXA5 237 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SYPL2Q5VXT5 272 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PACS1Q6VY07 963 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 DSTYKQ6XUX3 929 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 Q6ZNB5 142 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CLEC20AQ6ZU45 233 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF765Q7L2R6 523 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ARID3BQ8IVW6 561 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 DNAI2Q9GZS0 605 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 DCLRE1BQ9H816 532 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 IGSF9Q9P2J2 1179 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SF3B6Q9Y3B4 125 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF236Q9UL36 1845 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CLDN5O00501 218 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PTGESO14684 152 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GYG2O15488 501 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 LMNAP02545 664 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PRKCGP05129 697 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ATP5BP06576 529 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PTPN1P18031 435 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 RHCEP18577 417 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 MGAT1P26572 445 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GALK1P51570 392 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 RNF4P78317 190 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 RHDQ02161 417 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 AP1B1Q10567 949 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SEMA3BQ13214 749 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PDE1CQ14123 709 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CRYMQ14894 314 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PDK1Q15118 436 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PRAMEF19Q5SWL8 479 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF567Q8N184 647 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GPATCH11Q8N954 259 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 RNF169Q8NCN4 708 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PIP4K2CQ8TBX8 421 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SH3RF2Q8TEC5 729 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 FBXW5Q969U6 566 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GORASP1Q9BQQ3 440 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 NAT9Q9BTE0 207 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 MENTQ9BUN1 341 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 THAP1Q9NVV9 213 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 SLC17A6Q9P2U8 582 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 HBS1LQ9Y450 684 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 M0QYT0 321 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 IGFBP6P24592 240 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PSMB4P28070 264 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PRIM2P49643 509 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CRYBB1P53674 252 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 AIF1P55008 147 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 TUSC3Q13454 348 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CMPK2Q5EBM0 449 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 RFX8Q6ZV50 586 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CRLF3Q8IUI8 442 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 FAM149B1Q96BN6 582 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PPP1R10Q96QC0 940 aaKnown RBP7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PTPN18Q99952 460 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 CCDC106Q9BWC9 280 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 XPNPEP3Q9NQH7 507 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 BATF3Q9NR55 127 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PIGVQ9NUD9 493 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ARMCX1Q9P291 453 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 PSAT1Q9Y617 370 aa7.42□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF638Q14966 1978 aaKnown RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 LAMA3Q16787 3333 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FAM72CH0Y354 149 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 I6L893 689 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 FGF3P11487 239 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-202ENST00000360642 GNAT1P11488 350 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 YY1P25490 414 aa7.41□□□□□ -1.22
CLCN3-202ENST00000360642 HOXC8P31273 242 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms