RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SP110Q9HB58 689 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 PREBQ9HCU5 417 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 VPS45Q9NRW7 570 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 NMRK1Q9NWW6 199 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 F5H5T6 163 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 RAMP2O60895 175 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 CSE1LP55060 971 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 POLD3Q15054 466 aaPredicted RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 WASHC2DQ5SRD0 308 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 PDPK2PQ6A1A2 396 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 DENND5AQ6IQ26 1287 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 CES5AQ6NT32 575 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 RANBP10Q6VN20 620 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 KYAT3Q6YP21 454 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 IPMKQ8NFU5 416 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 RAB3IL1Q8TBN0 382 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 NRG4Q8WWG1 115 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ATP2A3Q93084 1043 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ISL2Q96A47 359 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 PABPC5Q96DU9 382 aaKnown RBP13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 MFSD3Q96ES6 412 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 RBBP8Q99708 897 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 FICDQ9BVA6 458 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 SLC13A1Q9BZW2 595 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 ARNT2Q9HBZ2 717 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 TDP1Q9NUW8 608 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
CSNK1E-201ENST00000359867 DOCK4Q8N1I0 1966 aa13.96□□□□□ -0.18
CSNK1E-201ENST00000359867 BIRC5O15392 142 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 TPH1P17752 444 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 DDX6P26196 483 aaKnown RBP eCLIP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 SLC11A2P49281 568 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ARFIP2P53365 341 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 SERINC3Q13530 473 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 SKIV2LQ15477 1246 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 INSCQ1MX18 579 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ACSBG2Q5FVE4 666 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ATAT1Q5SQI0 421 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 KCNMB4Q86W47 210 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 LMNTD2Q8IXW0 634 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 CFAP52Q8N1V2 620 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 DEFB123Q8N688 67 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 IMP4Q96G21 291 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 GUCD1Q96NT3 240 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 FSD1LQ9BXM9 530 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 DOCK8Q8NF50 2099 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 J3KR12 359 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 TSPAN3O60637 253 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 GLRA3O75311 464 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 OR1E1P30953 314 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 NUMBP49757 651 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 SGSHP51688 502 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 PDE1BQ01064 536 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 TSNAXIP1Q2TAA8 658 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 FOXB2Q5VYV0 432 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 TMEM154Q6P9G4 183 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 BBS7Q8IWZ6 715 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 BHMTQ93088 406 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 MRGPRX2Q96LB1 330 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 TRIM55Q9BYV6 548 aa13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 C20orf96Q9NUD7 363 aaPredicted RBP13.95□□□□□ -0.18
CSNK1E-201ENST00000359867 NVLO15381 856 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 GYG2O15488 501 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 NMBRP28336 390 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 HADHAP40939 763 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 VIPR2P41587 438 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 LIMK2P53671 638 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 INHBCP55103 352 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 MFSD4BQ5TF39 518 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 STRA8Q7Z7C7 330 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 LGI2Q8N0V4 545 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 MCUR1Q96AQ8 359 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 BTBD10Q9BSF8 475 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 POMKQ9H5K3 350 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 DCLRE1BQ9H816 532 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 KCNK13Q9HB14 408 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 SLC17A6Q9P2U8 582 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TPP1O14773 563 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 GSC2O15499 205 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TPD52L2O43399 206 aaKnown RBP13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TIMM44O43615 452 aa13.94□□□□□ -0.18
CSNK1E-201ENST00000359867 TGDSO95455 350 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms