RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 FNIP2Q9P278 1114 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 CIDEBQ9UHD4 219 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 EMCNQ9ULC0 261 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 SLC39A10Q9ULF5 831 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 FCF1Q9Y324 198 aaKnown RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 PCDHGC4Q9Y5F7 938 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 A0A1B0GVM2 712 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 TCAF2A6NFQ2 919 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 CD160O95971 181 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 ADH1AP07327 375 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 ACADSP16219 412 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 VARSP26640 1264 aaKnown RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 SLC1A2P43004 574 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 CBX2Q14781 532 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 GRM3Q14832 879 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 N4BP2L1Q5TBK1 243 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF470Q6ECI4 717 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 POTEHQ6S545 545 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 WDR60Q8WVS4 1066 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 POLR1EQ9GZS1 481 aaKnown RBP12.73□□□□□ -0.37
GGPS1-202ENST00000358966 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 RABL2BQ9UNT1 228 aa12.73□□□□□ -0.37
GGPS1-202ENST00000358966 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 TM9SF1O15321 606 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 GLUD1P00367 558 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 AHSGP02765 367 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 DHRS4L1P0CG22 281 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 GKP32189 559 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CSKP41240 450 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 YBEYP58557 167 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CMPK2Q5EBM0 449 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ATXN7L2Q5T6C5 722 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 IRGCQ6NXR0 463 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 TMEM53Q6P2H8 277 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 PPHLN1Q8NEY8 458 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 RAD9AQ99638 391 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 FBXO6Q9NRD1 293 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 TMEM216Q9P0N5 145 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 UBA2Q9UBT2 640 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 MARCOQ9UEW3 520 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 VPS28Q9UK41 221 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 SPO11Q9Y5K1 396 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CLDN11O75508 207 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 C5orf22Q49AR2 442 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ZNF554Q86TJ5 538 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 LRRC49Q8IUZ0 686 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 OR13C4Q8NGS5 318 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 OR13J1Q8NGT2 312 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 DNAJC9Q8WXX5 260 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ALKBH8Q96BT7 664 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CPNE1Q99829 537 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 CINPQ9BW66 212 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 MANSC1Q9H8J5 431 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-202ENST00000358966 NUMBLQ9Y6R0 609 aa12.72□□□□□ -0.37
GGPS1-202ENST00000358966 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.37
GGPS1-202ENST00000358966 KITP10721 976 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 ETS2P15036 469 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 BMPR1AP36894 532 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 GLRBP48167 497 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 SERPINB9P50453 376 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 LIMK2P53671 638 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 CDH18Q13634 790 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 ITIH4Q14624 930 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 SH2D4BQ5SQS7 431 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 ATG14Q6ZNE5 492 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 CYS1Q717R9 158 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 SLC41A1Q8IVJ1 513 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.37
GGPS1-202ENST00000358966 RFWD2Q8NHY2 731 aa12.71□□□□□ -0.37
GGPS1-202ENST00000358966 TMA16Q96EY4 203 aaKnown RBP12.71□□□□□ -0.37
GGPS1-202ENST00000358966 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.37
GGPS1-202ENST00000358966 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms