RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GALNT5Q7Z7M9 940 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 HDDC3Q8N4P3 179 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TRIM38O00635 465 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 GYPCP04921 128 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 RARGP13631 454 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 DCTN2Q13561 401 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ERICH5Q6P6B1 374 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 C8orf59Q8N0T1 100 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 LRRC17Q8N6Y2 441 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 KNL1Q8NG31 2342 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TCP10LQ8TDR4 215 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 COQ8BQ96D53 544 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ZMPSTE24O75844 475 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 APOC1P02654 83 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 CDC42P60953 191 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 PPIDQ08752 370 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 NAB1Q13506 487 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TOR1AIP1Q5JTV8 583 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF549Q6P9A3 640 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 LPPQ93052 612 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ZSWIM1Q9BR11 485 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 PCDHA3Q9Y5H8 950 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 LAMC1P11047 1609 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 CASKO14936 926 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 RIPK2O43353 540 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 RPL38P63173 70 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 FSTL1Q12841 308 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TMED8Q6PL24 325 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ABCB9Q9NP78 766 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 MANSC4A6NHS7 340 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 LINC00032P0C843 101 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 HERVK_113P62684 666 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TIMM50Q3ZCQ8 353 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 CCNYL2Q5T2Q4 361 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 A0A087X1B8 175 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 AKR1A1P14550 325 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TXNL4AP83876 142 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 ZBTB6Q15916 424 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 PHF19Q5T6S3 580 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 CYB5D1Q6P9G0 228 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TAS1R2Q8TE23 839 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 SAMD4AQ9UPU9 718 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 SAMHD1Q9Y3Z3 626 aaKnown RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 TNFAIP8O95379 198 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SCTRP47872 440 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 IRAK1P51617 712 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 VBP1P61758 197 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PRKG2Q13237 762 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 DEFB106AQ8N104 65 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 HMGCRP04035 888 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PSMB4P28070 264 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SSR2P43308 183 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 BNIP1Q12981 228 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 MSLNQ13421 630 aaPredicted RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ELOAQ14241 798 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 FAM46CQ5VWP2 391 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ALG1LQ6GMV1 187 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 HHIPL2Q6UWX4 724 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 OR5M3Q8NGP4 307 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 OR2L8Q8NGY9 312 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SETD7Q8WTS6 366 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PIH1D2Q8WWB5 315 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SENP8Q96LD8 212 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 A8MU76 341 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 TPP1O14773 563 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ANPEPP15144 967 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 FBXO33Q7Z6M2 555 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 HCAR2Q8TDS4 363 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 NELL1Q92832 810 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 LENG9Q96B70 501 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PABPC3Q9H361 631 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ALDH4A1P30038 563 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ALX1Q15699 326 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 KCNT2Q6UVM3 1135 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 CFAP206Q8IYR0 622 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 GHDCQ8N2G8 530 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 LRRN4Q8WUT4 740 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 BRF2Q9HAW0 419 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ING4Q9UNL4 249 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 H3BSH0 61 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 CST1P01037 141 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SPIRE1Q08AE8 756 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF155Q12901 538 aaPredicted RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 IL18R1Q13478 541 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 MPP2Q14168 576 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms