RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 RNPEPQ9H4A4 650 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SEMA3GQ9NS98 782 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SALL1Q9NSC2 1324 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 TSPAN4O14817 238 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 NKRFO15226 690 aaKnown RBP eCLIP8.05□□□□□ -1.12
HTT-201ENST00000355072 OR56A5P0C7T3 313 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 AXLP30530 894 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 TPTEP56180 551 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 KANK2Q63ZY3 851 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 CHAC2Q8WUX2 184 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 CLIC5Q9NZA1 410 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SH3D21A4FU49 640 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 RPS9P46781 194 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 HADHBP55084 474 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.123e-6■■■■□ 21.4
HTT-201ENST00000355072 C1orf189Q5VU69 101 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 TBC1D10CQ8IV04 446 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ZC3H7AQ8IWR0 971 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 SLC44A3Q8N4M1 653 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 FAM47BQ8NA70 645 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SLC6A16Q9GZN6 736 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 UNC93B1Q9H1C4 597 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 CAPN6Q9Y6Q1 641 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 MCOLN2Q8IZK6 566 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SETD6Q8TBK2 473 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 DIRAS2Q96HU8 199 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 PCIF1Q9H4Z3 704 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ACTR8Q9H981 624 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 EDF1O60869 148 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 PMPCBO75439 489 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 PTGR1Q14914 329 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ATP13A4Q4VNC1 1196 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SLC22A10Q63ZE4 541 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 OR8H1Q8NGG4 311 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 FUCA2Q9BTY2 467 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 NFKBIZQ9BYH8 718 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 S100A14Q9HCY8 104 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SRP68Q9UHB9 627 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 ZNF638Q14966 1978 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 CLRN2A0PK11 232 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ACSL1P33121 698 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 USP46P62068 366 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 COL28A1Q2UY09 1125 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SERPINA13PQ6UXR4 307 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ASB13Q8WXK3 278 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 BBS4Q96RK4 519 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 H3BNH8 94 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 HOXD10P28358 340 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 SREBF1P36956 1147 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 IDH2P48735 452 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 OAZ1P54368 228 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 EIPR1Q53HC9 387 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ASCC1Q8N9N2 400 aaKnown RBP8.05□□□□□ -1.12
HTT-201ENST00000355072 DCAKDQ8WVC6 231 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 BAP1Q92560 729 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 ADAMTS13Q76LX8 1427 aa8.05□□□□□ -1.12
HTT-201ENST00000355072 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 PTGES3LE9PB15 166 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 DUS1LQ6P1R4 473 aaKnown RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 ACTL9Q8TC94 416 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 CEP295NLQ96MC4 621 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 DMGDHQ9UI17 866 aaKnown RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 TESMINQ9Y4I5 508 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 ARFGEF2Q9Y6D5 1785 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 HIST1H2ABP04908 130 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 HACD4Q5VWC8 232 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 HIST3H2AQ7L7L0 130 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 TAB3Q8N5C8 712 aaPredicted RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 HIST1H2ACQ93077 130 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 CERS2Q96G23 380 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 TMEM47Q9BQJ4 181 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 NYAP2Q9P242 653 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 MCIDASD6RGH6 385 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 DDX3YO15523 660 aaKnown RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 NCK2O43639 380 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 OAZ2O95190 189 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 SLC13A2Q13183 592 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 TSPEARQ8WU66 669 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 ZBED3Q96IU2 234 aaPredicted RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 TLR10Q9BXR5 811 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 FAM126AQ9BYI3 521 aaPredicted RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 ABCB10Q9NRK6 738 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 XRN1Q8IZH2 1706 aaKnown RBP8.04□□□□□ -1.12
HTT-201ENST00000355072 C10orf71Q711Q0 1435 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 CTBP2P56545 445 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 ADAM17P78536 824 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 MAFIPQ8WZ33 124 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 HYLS1Q96M11 299 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 NPAP1Q9NZP6 1156 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 KCNH4Q9UQ05 1017 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 A0A087X0T9 212 aa8.04□□□□□ -1.12
HTT-201ENST00000355072 RIIAD1A6NNX1 92 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms