RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CLDND1Q9NY35 253 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 HNRNPRO43390 633 aaKnown RBP11.23□□□□□ -0.61
NEIL1-201ENST00000355059 GNAZP19086 355 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 ST8SIA6P61647 398 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEIL1-201ENST00000355059 PTK2BQ14289 1009 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 CSHL1Q14406 222 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 CCDC153Q494R4 210 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 LCA5Q86VQ0 697 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 ENDOVQ8N8Q3 282 aaKnown RBP11.23□□□□□ -0.61
NEIL1-201ENST00000355059 PANX3Q96QZ0 392 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 CCT7Q99832 543 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 ELAC1Q9H777 363 aaKnown RBP11.23□□□□□ -0.61
NEIL1-201ENST00000355059 PFDN4Q9NQP4 134 aa11.23□□□□□ -0.61
NEIL1-201ENST00000355059 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.23□□□□□ -0.61
NEIL1-201ENST00000355059 ARHGAP10A1A4S6 786 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 E7ESA3 106 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 FGFR3P22607 806 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 RFC2P35250 354 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 LBRQ14739 615 aaKnown RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SHHQ15465 462 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CERCAMQ5T4B2 595 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MARC1Q5VT66 337 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CAND1Q86VP6 1230 aaKnown RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 PHF21BQ96EK2 531 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ABHD8Q96I13 439 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 BBS2Q9BXC9 721 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 GRIP2Q9C0E4 1043 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SEMA6AQ9H2E6 1030 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 COPG2Q9UBF2 871 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 V9GYQ6 96 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 F8W8V4 182 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MPSTP25325 297 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 WASP42768 502 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ACTR3P61158 418 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 RHOAP61586 193 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 PDK3Q15120 406 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 FXNQ16595 210 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 NRF1Q16656 503 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SPANXN3Q5MJ09 141 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CYP2R1Q6VVX0 501 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 RCN3Q96D15 328 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 TMEM175Q9BSA9 504 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 OXCT2Q9BYC2 517 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ACE2Q9BYF1 805 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 HCFC1R1Q9NWW0 138 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 RRN3Q9NYV6 651 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SORCS3Q9UPU3 1222 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 NEDD8-MDP1E9PL57 170 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 RFPL1O75677 317 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SUPT7LO94864 414 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 C2P06681 752 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 HNRNPCP07910 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 STMN1P16949 149 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 TMEM259Q4ZIN3 620 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 AGKQ53H12 422 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MARK2Q7KZI7 788 aaKnown RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 STRADAQ7RTN6 431 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 SETD3Q86TU7 594 aaPredicted RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 ACMSDQ8TDX5 336 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 PTCD3Q96EY7 689 aaKnown RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MPP4Q96JB8 637 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 TUBGCP5Q96RT8 1024 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 FICDQ9BVA6 458 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 CNTN6Q9UQ52 1028 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 INSL5Q9Y5Q6 135 aa11.22□□□□□ -0.61
NEIL1-201ENST00000355059 MAP1BP46821 2468 aaKnown RBP11.22□□□□□ -0.61
NEIL1-201ENST00000355059 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-201ENST00000355059 HIDE1A8MVS5 230 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 INPPL1O15357 1258 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 NFKB1P19838 968 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 KLF10Q13118 480 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 GSTA3Q16772 222 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-201ENST00000355059 PQLC3Q8N755 202 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 BHLHE22Q8NFJ8 381 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-201ENST00000355059 KCTD4Q8WVF5 259 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 RPL10LQ96L21 214 aaKnown RBP11.21□□□□□ -0.61
NEIL1-201ENST00000355059 CCDC167Q9P0B6 97 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 CDH22Q9UJ99 828 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 DNAH12Q6ZR08 3092 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 GRM6O15303 877 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 PFKMP08237 780 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 EPCAMP16422 314 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 TPSB2P20231 275 aa11.21□□□□□ -0.61
NEIL1-201ENST00000355059 CDH5P33151 784 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 253.8 ms