RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLITRK4Q8IW52 837 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 SFTPA2Q8IWL1 248 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 DPEP2Q9H4A9 486 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 SYNCQ9H7C4 482 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ANLNQ9NQW6 1124 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 PIGVQ9NUD9 493 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 RCOR1Q9UKL0 485 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 OR1A2Q9Y585 309 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
RTN3-204ENST00000354497 RELNP78509 3460 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 ILVBLA1L0T0 632 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 TOR1BO14657 336 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 CHUKO15111 745 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 MAP3K7O43318 606 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 PCCBP05166 539 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 GLI1P08151 1106 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 IMPDH2P12268 514 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 XPAP23025 273 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 PAX7P23759 505 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 OAS2P29728 719 aaKnown RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 PRCPP42785 496 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 RNASE9P60153 205 aaKnown RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 NFATC4Q14934 902 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 LRRC14Q15048 493 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 POLD3Q15054 466 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 TPD52L1Q16890 204 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 LACTB2Q53H82 288 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 C11orf57Q6ZUT1 292 aaPredicted RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 PIM3Q86V86 326 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 RBM12BQ8IXT5 1001 aaKnown RBP11.29□□□□□ -0.6
RTN3-204ENST00000354497 GPR156Q8NFN8 814 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 ATL2Q8NHH9 583 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 ZNF606Q8WXB4 792 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 MIB2Q96AX9 1013 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 PDXPQ96GD0 296 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 CATSPER2Q96P56 530 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 TAAR9Q96RI9 348 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 DAAM1Q9Y4D1 1078 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 SCN8AQ9UQD0 1980 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
RTN3-204ENST00000354497 DRGXA6NNA5 263 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 EFCAB8A8MWE9 144 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 NKX2-8O15522 239 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 DUX1O43812 170 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 RAD1O60671 282 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ZMPSTE24O75844 475 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 KRT7P08729 469 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 ALDH4A1P30038 563 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 HNRNPH1P31943 449 aaKnown RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 UGT1A3P35503 534 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 PPM1FP49593 454 aaPredicted RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 PEX5P50542 639 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 RPS6KA3P51812 740 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 MLLT10P55197 1068 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 OR1D5P58170 312 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 SNRPD1P62314 119 aaKnown RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 GCNT1Q02742 428 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 GNA12Q03113 381 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 DEUP1Q05D60 604 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 INPP5AQ14642 412 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 BRMS1LQ5PSV4 323 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ATXN7L2Q5T6C5 722 aaPredicted RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ZNF354CQ86Y25 554 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ZNF683Q8IZ20 524 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 C16orf45Q96MC5 204 aaPredicted RBP11.28□□□□□ -0.6
RTN3-204ENST00000354497 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 APOOQ9BUR5 198 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
RTN3-204ENST00000354497 ARHGEF38Q9NXL2 777 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms