RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PHF12Q96QT6 1004 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 CPXM1Q96SM3 734 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 DDA1Q9BW61 102 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 OSBPL1AQ9BXW6 950 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 TMEM168Q9H0V1 697 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 CLSTN2Q9H4D0 955 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 MRPL40Q9NQ50 206 aaKnown RBP15.97■□□□□ 0.15
DDX55-202ENST00000354291 PRDM8Q9NQV8 689 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 OCIAD1Q9NX40 245 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 MOSPD1Q9UJG1 213 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 DGKBQ9Y6T7 804 aa15.97■□□□□ 0.15
DDX55-202ENST00000354291 TTLL8A6PVC2 850 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 BECN2A8MW95 431 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 PRKCGP05129 697 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
DDX55-202ENST00000354291 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.15
DDX55-202ENST00000354291 XPAP23025 273 aaPredicted RBP15.96■□□□□ 0.15
DDX55-202ENST00000354291 ERCC5P28715 1186 aaPredicted RBP15.96■□□□□ 0.15
DDX55-202ENST00000354291 CD1CP29017 333 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 CXCR3P49682 368 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 SNX16P57768 344 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 BIRC2Q13490 618 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 MAN2A1Q16706 1144 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 BRMS1LQ5PSV4 323 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 NKAIN2Q5VXU1 208 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 C11orf57Q6ZUT1 292 aaPredicted RBP15.96■□□□□ 0.15
DDX55-202ENST00000354291 ASB18Q6ZVZ8 466 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 KDELC2Q7Z4H8 507 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 WDTC1Q8N5D0 677 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 CCL4L1Q8NHW4 92 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 C1orf74Q96LT6 269 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 PILRAQ9UKJ1 303 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
DDX55-202ENST00000354291 IGLV3-10A0A075B6K4 115 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 ZW10O43264 779 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 GSRP00390 522 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 TCN2P20062 427 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 MAP4P27816 1152 aaKnown RBP15.95■□□□□ 0.14
DDX55-202ENST00000354291 KRT9P35527 623 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 LIMK2P53671 638 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 DEUP1Q05D60 604 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
DDX55-202ENST00000354291 ANKS6Q68DC2 871 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 PASD1Q8IV76 773 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 SRRM1Q8IYB3 904 aaKnown RBP15.95■□□□□ 0.14
DDX55-202ENST00000354291 NLGN4XQ8N0W4 816 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 GALNT11Q8NCW6 608 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 NLGN4YQ8NFZ3 816 aaPredicted RBP15.95■□□□□ 0.14
DDX55-202ENST00000354291 OR56A4Q8NGH8 313 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 VOPP1Q96AW1 172 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 EFHD1Q9BUP0 239 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 DNAJC12Q9UKB3 198 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 ESPL1Q14674 2120 aa15.95■□□□□ 0.14
DDX55-202ENST00000354291 MKRN2OSH3BPM6 223 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 DAB1O75553 588 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 POU3F2P20265 443 aaPredicted RBP15.94■□□□□ 0.14
DDX55-202ENST00000354291 DCTP40126 519 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 SULT1E1P49888 294 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 COPB1P53618 953 aaKnown RBP15.94■□□□□ 0.14
DDX55-202ENST00000354291 BPIFB4P59827 614 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 MC1RQ01726 317 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 SLC6A3Q01959 620 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 APBA1Q02410 837 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 RAD51Q06609 339 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 TRA2AQ13595 282 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX55-202ENST00000354291 TMEM52BQ4KMG9 183 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 OLFML1Q6UWY5 402 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 NETO2Q8NC67 525 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 PLA2G15Q8NCC3 412 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 KIAA1524Q8TCG1 905 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 STARD8Q92502 1023 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 ARHGEF2Q92974 986 aaKnown RBP15.94■□□□□ 0.14
DDX55-202ENST00000354291 NPY6RQ99463 290 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 CTRCQ99895 268 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 TUBGCP2Q9BSJ2 902 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 ZYG11BQ9C0D3 744 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 NDST4Q9H3R1 872 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 SUDS3Q9H7L9 328 aaPredicted RBP15.94■□□□□ 0.14
DDX55-202ENST00000354291 CYP4F12Q9HCS2 524 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 FGF22Q9HCT0 170 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 SPATS2LQ9NUQ6 558 aaKnown RBP15.94■□□□□ 0.14
DDX55-202ENST00000354291 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX55-202ENST00000354291 ZNF212Q9UDV6 495 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 HPCAL4Q9UM19 191 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 MED13Q9UHV7 2174 aa15.94■□□□□ 0.14
DDX55-202ENST00000354291 CACNB4O00305 520 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 FOXN3O00409 490 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 ERBB2P04626 1255 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 PPM1FP49593 454 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 RIPPLY3P57055 190 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 CLPPQ16740 277 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 DPCR1Q3MIW9 517 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 VWA3BQ502W6 1294 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 CT47A1Q5JQC4 288 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 TCTN3Q6NUS6 607 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 CCDC13Q8IYE1 715 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 OR4D9Q8NGE8 314 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 CPT1CQ8TCG5 803 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 ZDHHC1Q8WTX9 485 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms