RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ST6GALNAC4Q9H4F1 302 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 ATP13A2Q9NQ11 1180 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 GMIPQ9P107 970 aa13.31□□□□□ -0.28
IFT88-202ENST00000351808 PNMA8BQ9ULN7 279 aaPredicted RBP13.31□□□□□ -0.28
IFT88-202ENST00000351808 AQP12BA6NM10 295 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 C16orf96A6NNT2 1141 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 A8MX80 341 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 NME4O00746 187 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 NRP2O60462 931 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GABARAPO95166 117 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 GARSP41250 739 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 MEP1AQ16819 746 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 STEAP4Q687X5 459 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 MAP4K3Q8IVH8 894 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 AQP12AQ8IXF9 295 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 FAM109AQ8N4B1 249 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PLD5Q8N7P1 536 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 CHAC2Q8WUX2 184 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 MFSD3Q96ES6 412 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 CDHR1Q96JP9 859 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PEBP4Q96S96 227 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ACE2Q9BYF1 805 aaPredicted RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 WDR11Q9BZH6 1224 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 AP3D1O14617 1153 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 INPP4BO15327 924 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 B4GALT4O60513 344 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 SNX2O60749 519 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 HMGCRP04035 888 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 C2P06681 752 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 TGFBR1P36897 503 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GP5P40197 560 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GLRBP48167 497 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GTF2A2P52657 109 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 POU6F2P78424 691 aaPredicted RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 CYP51A1Q16850 503 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 TUBA3EQ6PEY2 450 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 METTL4Q8N3J2 472 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GRPEL2Q8TAA5 225 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PROX1Q92786 737 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 RTP4Q96DX8 246 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 HSFY1Q96LI6 401 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 FTHL17Q9BXU8 183 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 POLHQ9Y253 713 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 SNX5Q9Y5X3 404 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ZFC3H1O60293 1989 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 SLCO1B7G3V0H7 640 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 H0YAE9 185 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 SSX4O60224 188 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PTTG1O95997 202 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 MSL3P1P0C860 447 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 FSHRP23945 695 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 MGAT1P26572 445 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 S100A5P33763 92 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 RFC2P35250 354 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 GJA9P57773 515 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 OR2B6P58173 313 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 TFAMQ00059 246 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 GALNT1Q10472 559 aaPredicted RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 TFDP2Q14188 446 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ZNF181Q2M3W8 571 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 RBM48Q5RL73 367 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 LIPMQ5VYY2 423 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 CCNYL1Q8N7R7 359 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 KDM1BQ8NB78 822 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PIK3R3Q92569 461 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
IFT88-202ENST00000351808 SLA2Q9H6Q3 261 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 ARHGAP28Q9P2N2 729 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 PCDHB3Q9Y5E6 796 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 V9GYQ6 96 aa13.3□□□□□ -0.28
IFT88-202ENST00000351808 HNRNPDLO14979 420 aaKnown RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 MTHFD1P11586 935 aaKnown RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 AGXTP21549 392 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 IL12AP29459 219 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 HTR3AP46098 478 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 NPTX2P47972 431 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 YBX1P67809 324 aaKnown RBP13.29□□□□□ -0.28
IFT88-202ENST00000351808 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 BOLA3Q53S33 107 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
IFT88-202ENST00000351808 UBE2Q1Q7Z7E8 422 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms