RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TOP3BO95985 862 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 MT-CO1P00395 513 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 SCNN1BP51168 640 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 GEMP55040 296 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 WNT3AP56704 352 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 KLC1Q07866 573 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 CDH17Q12864 832 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 NAPEPLDQ6IQ20 393 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 FAM136AQ96C01 138 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 IMP4Q96G21 291 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 FCRL3Q96P31 734 aaPredicted RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 CCDC106Q9BWC9 280 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 STX18Q9P2W9 335 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 WNT6Q9Y6F9 365 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 K7ERQ8 282 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 CD70P32970 193 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 SERPINB9P50453 376 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 CCNHP51946 323 aaPredicted RBP13.5□□□□□ -0.25
UBA3-201ENST00000349511 CDK18Q07002 472 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 STX3Q13277 289 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 RCN2Q14257 317 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 RAB30Q15771 203 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 DENND5AQ6IQ26 1287 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 ZCCHC23Q6ZST2 131 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 FAM217AQ8IXS0 508 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
UBA3-201ENST00000349511 ARRDC2Q8TBH0 407 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 ATP2A3Q93084 1043 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 CINPQ9BW66 212 aaPredicted RBP13.5□□□□□ -0.25
UBA3-201ENST00000349511 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
UBA3-201ENST00000349511 POLR1EQ9GZS1 481 aaKnown RBP13.5□□□□□ -0.25
UBA3-201ENST00000349511 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 MYLKQ15746 1914 aa13.5□□□□□ -0.25
UBA3-201ENST00000349511 SPECC1L-ADORA2AF8WAN1 911 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 BIRC5O15392 142 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 FGF19O95750 216 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 CD160O95971 181 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 ERVK-10P10266 1014 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 VIPR2P41587 438 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
UBA3-201ENST00000349511 KDSRQ06136 332 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 CYTH1Q15438 398 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 MPPE1Q53F39 396 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 TIFABQ6ZNK6 161 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 NAT16Q8N8M0 369 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
UBA3-201ENST00000349511 TIFAQ96CG3 184 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 ZNF510Q9Y2H8 683 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
UBA3-201ENST00000349511 E2F8A0AVK6 867 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 CCDC189A1A4V9 331 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 TRIM24O15164 1050 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 PRKCGP05129 697 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 PGAM1P18669 254 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 DDX6P26196 483 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBA3-201ENST00000349511 NMBRP28336 390 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 ADRA1AP35348 466 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 IRX4P78413 519 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 LMAN2Q12907 356 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 IRGCQ6NXR0 463 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 KDELC1Q6UW63 502 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 LINC00523Q86TU6 105 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 SCUBE1Q8IWY4 988 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 MYLIPQ8WY64 445 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
UBA3-201ENST00000349511 RILPQ96NA2 401 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 YIPF3Q9GZM5 350 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 VPS51Q9UID3 782 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 LRCH1Q9Y2L9 728 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 WASF2Q9Y6W5 498 aa13.49□□□□□ -0.25
UBA3-201ENST00000349511 PRR5-ARHGAP8B1AHC4 643 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 ZNF197O14709 1029 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 GLP2RO95838 553 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 POLBP06746 335 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 ARHGAP8P85298 464 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 MPP3Q13368 585 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 KCNC3Q14003 757 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 SEPT6Q14141 434 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 GALNT3Q14435 633 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 ZRSR2Q15696 482 aaKnown RBP13.48□□□□□ -0.25
UBA3-201ENST00000349511 ZNF77Q15935 545 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 C16orf46Q6P387 395 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 RANBP10Q6VN20 620 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
UBA3-201ENST00000349511 GET4Q7L5D6 327 aaPredicted RBP13.48□□□□□ -0.25
UBA3-201ENST00000349511 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
UBA3-201ENST00000349511 TDHQ8IZJ6 230 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms