RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HTR3CQ8WXA8 447 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 TMCO6Q96DC7 493 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC115Q96NT0 180 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 BDH2Q9BUT1 245 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SAE1Q9UBE0 346 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 SPACA6W5XKT8 324 aa11.14□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC154A6NI56 674 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NFICP08651 508 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 KCNA5P22460 613 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 AQP4P55087 323 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 RPS7P62081 194 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 KHDC1Q4VXA5 237 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TBC1D21Q8IYX1 336 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ANKRD53Q8N9V6 530 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ASB7Q9H672 318 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ACTR8Q9H981 624 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 GTF2A1LQ9UNN4 478 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 REXO2Q9Y3B8 237 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 FADS2P1A8MWK0 482 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP7B1O75881 506 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MIPP30301 263 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC6A3Q01959 620 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PPIL2Q13356 520 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MZT2AQ6P582 158 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TMLHEQ9NVH6 421 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 THG1LQ9NWX6 298 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 DISP2A7MBM2 1401 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ATP6V1G2-DDX39BF2Z307 99 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 E2F3O00716 465 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TRDMT1O14717 391 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MAGEC1O60732 1142 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC2A4P14672 509 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 POU1F1P28069 291 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TBX2Q13207 712 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NCF4Q15080 339 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 LRRC8DQ7L1W4 858 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 KCNMB4Q86W47 210 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 VGLL2Q8N8G2 317 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 APBA2Q99767 749 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 WDR18Q9BV38 432 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 FBXO10Q9UK96 956 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 F8VP50 259 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 VAPBO95292 243 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CRABP2P29373 138 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TNFSF9P41273 254 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ATP6AP1LQ52LC2 224 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MAP4K3Q8IVH8 894 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ARMC7Q9H6L4 198 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ZDHHC6Q9H6R6 413 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 DNPEPQ9ULA0 475 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CAPN8A6NHC0 703 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PRSS44E7EML9 344 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PTGES3LE9PB15 166 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PROCP04070 461 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TFPTP0C1Z6 253 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 FUT4P22083 530 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 SSTR1P30872 391 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 MGAT5Q09328 741 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 POTEHQ6S545 545 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 RIOX2Q8IUF8 465 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 KCTD14Q9BQ13 255 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TBL1YQ9BQ87 522 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 PORCNQ9H237 461 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 ZMYM5Q9UJ78 669 aa11.13□□□□□ -0.63
SMARCE1-202ENST00000348513 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 H3BSA7 217 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 NR4A1P22736 598 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 GLRA2P23416 452 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 AXLP30530 894 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 RPL21P46778 160 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 ENTPD1P49961 510 aa11.12□□□□□ -0.63
SMARCE1-202ENST00000348513 NR6A1Q15406 480 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms