RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MTSS1O43312 755 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 GRAP2O75791 330 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SNRPB2P08579 225 aaKnown RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 CTSHP09668 335 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 IL10P22301 178 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 PSMB4P28070 264 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 RPL34P49207 117 aaKnown RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 IRF9Q00978 393 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 MERTKQ12866 999 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 BNIP2Q12982 314 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SLC36A3Q495N2 470 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 C8orf82Q6P1X6 216 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 KCNMB4Q86W47 210 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 LSMEM2Q8N112 164 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 OR6B3Q8NGW1 331 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 ZSCAN18Q8TBC5 510 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 AGR3Q8TD06 166 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SLC35F5Q8WV83 523 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SCYL1Q96KG9 808 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SLX1AQ9BQ83 275 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 ADI1Q9BV57 179 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 BRD8Q9H0E9 1235 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 TSPYL2Q9H2G4 693 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 NOL11Q9H8H0 719 aaKnown RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 EML4Q9HC35 981 aaKnown RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 NCKIPSDQ9NZQ3 722 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SELENONQ9NZV5 590 aa15.96■□□□□ 0.15
HMGA1-202ENST00000347617 SCHIP1Q9P0W5 487 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-202ENST00000347617 ZCWPW2A0A1B0GU75 182 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 KCNU1A8MYU2 1149 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TARM1B6A8C7 271 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 KPNA4O00629 521 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 SPTLC1O15269 473 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PSMD3O43242 534 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 SULT1C4O75897 302 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ZBTB11O95625 1053 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 JUNBP17275 347 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TCN1P20061 433 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 HALP42357 657 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 NAGLUP54802 743 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ORC1Q13415 861 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 SEPT6Q14141 434 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 RGS21Q2M5E4 152 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 AGMOQ6ZNB7 445 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 LINC00299Q6ZSB3 139 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TMEM86AQ8N2M4 240 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TMEM151AQ8N4L1 468 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 SCAIQ8N9R8 606 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PCYOX1LQ8NBM8 494 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 LEMD2Q8NC56 503 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF296Q8WUU4 475 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PIWIL1Q96J94 861 aaKnown RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ATAD3AQ9NVI7 634 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PKD2L2Q9NZM6 624 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 GABRDO14764 452 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 MRASO14807 208 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 CSPG5O95196 566 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 CD52P31358 61 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 CDH15P55291 814 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 FASTKQ14296 549 aaKnown RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PAFAH1B3Q15102 231 aaKnown RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TMTC4Q5T4D3 741 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 PPP1R26Q5T8A7 1209 aaPredicted RBP15.95■□□□□ 0.14
HMGA1-202ENST00000347617 TMEM198Q66K66 360 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 LRRC8EQ6NSJ5 796 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 GK5Q6ZS86 529 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 CCDC80Q76M96 950 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 SPRED1Q7Z699 444 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ACOT1Q86TX2 421 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 FEM1CQ96JP0 617 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 DCUN1D5Q9BTE7 237 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 ANLNQ9NQW6 1124 aa15.95■□□□□ 0.14
HMGA1-202ENST00000347617 HTR3EA5X5Y0 456 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 SOCS2O14508 198 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UBDO15205 165 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 NCAM2O15394 837 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ATE1O95260 518 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UGT1A6P19224 532 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UGT1A1P22309 533 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UGT1A4P22310 534 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 FASP25445 335 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UGT1A3P35503 534 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UGT1A5P35504 534 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ACADSBP45954 432 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 GALNT1Q10472 559 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ATP6AP1Q15904 470 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 C6orf10Q5SRN2 563 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 BSPRYQ5W0U4 402 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 ZNF567Q8N184 647 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 PCDH20Q8N6Y1 951 aaKnown RBP15.94■□□□□ 0.14
HMGA1-202ENST00000347617 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.94■□□□□ 0.144e-6■■■■■ 48.1
HMGA1-202ENST00000347617 NRBF2Q96F24 287 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 MAGED4Q96JG8 741 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 UROC1Q96N76 676 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 GAD1Q99259 594 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 HOPXQ9BPY8 73 aaPredicted RBP15.94■□□□□ 0.14
HMGA1-202ENST00000347617 MEAF6Q9HAF1 191 aa15.94■□□□□ 0.14
HMGA1-202ENST00000347617 TRMT13Q9NUP7 481 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms