RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 PRKD1Q15139 912 aaPredicted RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 ITIH5Q86UX2 942 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.12□□□□□ -0.318e-6■■■■□ 25.6
TCF3-202ENST00000344749 RTL3Q8N8U3 475 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 RP9Q8TA86 221 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 LINGO1Q96FE5 620 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 OPTCQ9UBM4 332 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SLC2A6Q9UGQ3 507 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 AZIN1O14977 448 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 ADCY6O43306 1168 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TYROBPO43914 113 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 KRT6AP02538 564 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 KRT6BP04259 564 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 FAM58BPP0C7Q3 252 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 PCNAP12004 261 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 KRT6CP48668 564 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 IDH3AP50213 366 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 CRY1Q16526 586 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 FUT10Q6P4F1 479 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 CENPLQ8N0S6 344 aaPredicted RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 SCLYQ96I15 445 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TXLNGYQ9BZA5 131 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SH3BP4Q9P0V3 963 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 DDX60Q8IY21 1712 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 CAPN8A6NHC0 703 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 IGSF6O95976 241 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 HLA-DPA1P20036 260 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TACR2P21452 398 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 SLC1A2P43004 574 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 GLUD2P49448 558 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 NOGQ13253 232 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 C11orf74Q86VG3 221 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SYTL1Q8IYJ3 562 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 DACT3Q96B18 629 aaPredicted RBP13.12□□□□□ -0.31
TCF3-202ENST00000344749 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SPATA16Q9BXB7 569 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 SLC25A51Q9H1U9 297 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 COL4A1P02462 1669 aa13.12□□□□□ -0.31
TCF3-202ENST00000344749 OR6C75A6NL08 312 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 C5orf58C9J3I9 102 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 PIRO00625 290 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 KCNE1P15382 129 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 HSPA13P48723 471 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 PPIDQ08752 370 aaKnown RBP13.11□□□□□ -0.31
TCF3-202ENST00000344749 CPSF6Q16630 551 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCF3-202ENST00000344749 ARFGAP1Q8N6T3 406 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 FETUBQ9UGM5 382 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
TCF3-202ENST00000344749 COL2A1P02458 1487 aaPredicted RBP13.11□□□□□ -0.31
TCF3-202ENST00000344749 FAM159BA6NKW6 160 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 PFKPQ01813 784 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 DSELQ8IZU8 1212 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■■□ 26.7
TCF3-202ENST00000344749 FAM124BQ9H5Z6 455 aaPredicted RBP13.11□□□□□ -0.31
TCF3-202ENST00000344749 GKN1Q9NS71 199 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 J3KR12 359 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 CLOCKO15516 846 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 CNMDO75829 334 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 GABRR2P28476 465 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 PRIM2P49643 509 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 CLYBLQ8N0X4 340 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 NKAPQ8N5F7 415 aaKnown RBP13.11□□□□□ -0.31
TCF3-202ENST00000344749 FBXO30Q8TB52 745 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 ANKRD27Q96NW4 1050 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 GPR21Q99679 349 aa13.11□□□□□ -0.31
TCF3-202ENST00000344749 SERPINA4P29622 427 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 NEK3P51956 506 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 RPS27LQ71UM5 84 aaKnown RBP13.1□□□□□ -0.31
TCF3-202ENST00000344749 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 OSGEPL1Q9H4B0 414 aa13.1□□□□□ -0.31
TCF3-202ENST00000344749 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms