RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SIGLEC10Q96LC7 697 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 RPRD1AQ96P16 312 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 CYTH2Q99418 400 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 DDX50Q9BQ39 737 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 NDFIP2Q9NV92 336 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 ZC3H7BQ9UGR2 993 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 SMG1Q96Q15 3661 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-202ENST00000344114 A0A1W2PQF6 199 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 ZBTB24O43167 697 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 HOXC11O43248 304 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 SH3BP5O60239 455 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 CACNG3O60359 315 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 AVILO75366 819 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 STC2O76061 302 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 JCHAINP01591 159 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 FTH1P19P0C7X4 201 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 CCNB1P14635 433 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 HOXB2P14652 356 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 GCAP28676 217 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 CD68P34810 354 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 YBEYP58557 167 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 TMED2Q15363 201 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 TRIP6Q15654 476 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 SKIDA1Q1XH10 827 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 PARP15Q460N3 678 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 PREPLQ4J6C6 727 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 ALFQ53S48 1182 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 KCTD11Q693B1 232 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 C19orf48Q6RUI8 117 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 AGGF1Q8N302 714 aaeCLIP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 TERB1Q8NA31 727 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 IGSF8Q969P0 613 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 AGAP3Q96P47 875 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 XPO6Q96QU8 1125 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 EBNA1BP2Q99848 306 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 NAT9Q9BTE0 207 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 CTNNAL1Q9UBT7 734 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF212Q9UDV6 495 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 IPO11Q9UI26 975 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 TTLL3Q9Y4R7 772 aa13.63□□□□□ -0.23
HERPUD1-202ENST00000344114 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 TBC1D3BA6NDS4 549 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 RASA4BC9J798 803 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 POC1B-GALNT4F8VUJ3 575 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 RASA4O43374 803 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF217O75362 1048 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 TULP3O75386 442 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 ANXA9O76027 345 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 NEBLO76041 1014 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 CNTN5O94779 1100 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 NTSR1P30989 418 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 MDH1P40925 334 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 IRAK1P51617 712 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 GNGT1P63211 74 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 COL28A1Q2UY09 1125 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 FAM133BQ5BKY9 247 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 TTC39BQ5VTQ0 682 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 STEAP4Q687X5 459 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 ARHGAP36Q6ZRI8 547 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 TFAP2DQ7Z6R9 452 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 LINC00523Q86TU6 105 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 LGI2Q8N0V4 545 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 NAT16Q8N8M0 369 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 GSDMBQ8TAX9 411 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 CFAP36Q96G28 342 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF419Q96HQ0 510 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 PAFAH2Q99487 392 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 SELENOSQ9BQE4 189 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 DHRS4Q9BTZ2 278 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 KLF16Q9BXK1 252 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 SP110Q9HB58 689 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 DEC1Q9P2X7 70 aa13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 AAR2Q9Y312 384 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-202ENST00000344114 SDR42E2A6NKP2 422 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 F5H423 210 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 RAMP2O60895 175 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 NDUFV2P19404 249 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 PRKCHP24723 683 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CORO1AP31146 461 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 GEMP55040 296 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 CDH4P55283 916 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 IL10RBQ08334 325 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 MTM1Q13496 603 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 FAM182AQ5T1J6 154 aa13.61□□□□□ -0.23
HERPUD1-202ENST00000344114 ADGRD1Q6QNK2 874 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms