RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 CA5BQ9Y2D0 317 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 NBEAQ8NFP9 2946 aa18.16■□□□□ 0.5
USF2-202ENST00000343550 TP53BP1Q12888 1972 aaPredicted RBP18.15■□□□□ 0.5
USF2-202ENST00000343550 hCG_1818297A0A087WSY0 165 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 TSPAN11A1L157 253 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 TRAFD1O14545 582 aaPredicted RBP18.15■□□□□ 0.5
USF2-202ENST00000343550 SLC31A1O15431 190 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 SPINT1O43278 529 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 TSPAN6O43657 245 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 ITIH2P19823 946 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 SERPINA4P29622 427 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 HNF1BP35680 557 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 NR2C2P49116 596 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 MAXP61244 160 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 BCL2L1Q07817 233 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 PPIDQ08752 370 aaKnown RBP18.15■□□□□ 0.5
USF2-202ENST00000343550 PDK1Q15118 436 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 UGP2Q16851 508 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 TMEM259Q4ZIN3 620 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 BRAT1Q6PJG6 821 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 CCDC50Q8IVM0 306 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 CCDC13Q8IYE1 715 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 SYCE1Q8N0S2 351 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 TMEM145Q8NBT3 493 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 KLK6Q92876 244 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 ZNF830Q96NB3 372 aaPredicted RBP18.15■□□□□ 0.5
USF2-202ENST00000343550 OLFM3Q96PB7 478 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 NOD2Q9HC29 1040 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 NT5MQ9NPB1 228 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 RBM22Q9NW64 420 aaKnown RBP eCLIP18.15■□□□□ 0.5
USF2-202ENST00000343550 SAE1Q9UBE0 346 aaPredicted RBP18.15■□□□□ 0.5
USF2-202ENST00000343550 GGT7Q9UJ14 662 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 AMFRQ9UKV5 643 aa18.15■□□□□ 0.5
USF2-202ENST00000343550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.14■□□□□ 0.49
USF2-202ENST00000343550 KRT86O43790 486 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 PRLRP16471 622 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 SUOXP51687 545 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 CLDN6P56747 220 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 RWDD2BP57060 319 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 COPS2P61201 443 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 RPS21P63220 83 aaKnown RBP18.14■□□□□ 0.49
USF2-202ENST00000343550 RALGPS1Q5JS13 557 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 LRRC73Q5JTD7 316 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 PEX26Q7Z412 305 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 ZSWIM9Q86XI8 627 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 ALG3Q92685 438 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 SLC17A9Q9BYT1 436 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 SCUBE2Q9NQ36 999 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 AMACRQ9UHK6 382 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 PCDHGC4Q9Y5F7 938 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 APC2O95996 2303 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 ACACAQ13085 2346 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 ADAMTS20P59510 1910 aa18.14■□□□□ 0.49
USF2-202ENST00000343550 NEMP1O14524 444 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 SDC3O75056 442 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 PAK4O96013 591 aaPredicted RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 CKMT2P17540 419 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 PPP2R5EQ16537 467 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 KIAA1161Q6NSJ0 714 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 BZW1Q7L1Q6 419 aaKnown RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 PDZD3Q86UT5 571 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 MYOCQ99972 504 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 HEMGNQ9BXL5 484 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 BRD8Q9H0E9 1235 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 CAPN6Q9Y6Q1 641 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 IGLON5A6NGN9 336 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 KCNK1O00180 336 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 HTRA2O43464 458 aaPredicted RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 JCHAINP01591 159 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 CCDC175P0C221 793 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 THEGLP0DJG4 465 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 PYGMP11217 842 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 TGM2P21980 687 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 POLR2LP62875 67 aaKnown RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 ITKQ08881 620 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 AP1B1Q10567 949 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 ILKQ13418 452 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 COL9A2Q14055 689 aaPredicted RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 FGL2Q14314 439 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 CFAP58Q5T655 872 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 ALG1LQ6GMV1 187 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 ZNF662Q6ZS27 426 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 B4GALNT4Q76KP1 1039 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 SLC25A45Q8N413 288 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 P3H4Q92791 437 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 IL12RB2Q99665 862 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 SEMA3CQ99985 751 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 C1QTNF2Q9BXJ5 285 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 POLR1EQ9GZS1 481 aaKnown RBP18.13■□□□□ 0.49
USF2-202ENST00000343550 EFR3BQ9Y2G0 817 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 ATP8A1Q9Y2Q0 1164 aa18.13■□□□□ 0.49
USF2-202ENST00000343550 TRPM6Q9BX84 2022 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 ITPR1Q14643 2758 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 KNTC1P50748 2209 aa18.12■□□□□ 0.49
USF2-202ENST00000343550 ANKRD36A6QL64 1941 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms