RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PYDC1Q8WXC3 89 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 CHP1Q99653 195 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 REXO2Q9Y3B8 237 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ARAP3Q8WWN8 1544 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 AARDQ4LEZ3 155 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 GHDCQ8N2G8 530 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 OR4A15Q8NGL6 344 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ING5Q8WYH8 240 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 LGR4Q9BXB1 951 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 EIF3KQ9UBQ5 218 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 GTF3C4Q9UKN8 822 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 TBX20Q9UMR3 447 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ATMINO43313 823 aaPredicted RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 RPS9P46781 194 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PDK3Q15120 406 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 GLRA4Q5JXX5 417 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 C14orf166Q9Y224 244 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 GRXCR2A6NFK2 248 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 SLC9A3R1O14745 358 aaPredicted RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ELK3P41970 407 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 LLGL2Q6P1M3 1020 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 GULP1Q9UBP9 304 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 SLC25A27O95847 323 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 PROCP04070 461 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 OVOS1Q6IE37 1185 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ELMO1Q92556 727 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 MYMKA6NI61 221 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CLDN25C9JDP6 229 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 H7C2Y5 167 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 AIPO00170 330 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 GSC2O15499 205 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CYP2F1P24903 491 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 IRX2Q9BZI1 471 aaPredicted RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF12P17014 697 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CHMP24386 653 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CEP76Q8TAP6 659 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 IKZF2Q9UKS7 526 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 F5H6K3 240 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 PEPDP12955 493 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 PAX7P23759 505 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 NAMPTP43490 491 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 KLRC3Q07444 240 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 GFM1Q96RP9 751 aaKnown RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF175Q9Y473 711 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 CYB561D2O14569 222 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ZNF14P17017 642 aaPredicted RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ST3GAL4Q11206 333 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 INTS6LQ5JSJ4 861 aaKnown RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 SLC44A3Q8N4M1 653 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 ITPKBP27987 946 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 TXNL4AP83876 142 aaKnown RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 KLHL26Q53HC5 615 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 PPP1R13LQ8WUF5 828 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 RIT2Q99578 217 aa17.68■□□□□ 0.42
SMAD4-201ENST00000342988 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
SMAD4-201ENST00000342988 BORCS7-ASMTA0A0B4J1R7 106 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 HOXC6P09630 235 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 PDHBP11177 359 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 LIPEQ05469 1076 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SP140Q13342 867 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 GPR107Q5VW38 600 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 BORCS7Q96B45 105 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 FUT8Q9BYC5 575 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 ANKEF1Q9NU02 776 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 TBC1D14Q9P2M4 693 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 COPS7AQ9UBW8 275 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SPARCP09486 303 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 VDRP11473 427 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 THAP6Q8TBB0 222 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SMG7Q92540 1137 aaKnown RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 CXorf40BQ96DE9 158 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 CDC42EP4Q9H3Q1 356 aaKnown RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 WASF3Q9UPY6 502 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 DHRS12A0PJE2 317 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SPP2Q13103 211 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 AP5B1Q2VPB7 878 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 CIR1Q86X95 450 aaPredicted RBP17.67■□□□□ 0.42
SMAD4-201ENST00000342988 HCAR2Q8TDS4 363 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 RBM22Q9NW64 420 aaKnown RBP eCLIP17.67■□□□□ 0.421e-11■■■□□ 16.5
SMAD4-201ENST00000342988 MTMR4Q9NYA4 1195 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 OTOFQ9HC10 1997 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 A0A0J9YVX5 310 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 SCN2BO60939 215 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 AP2A2O94973 939 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 HNF4AP41235 474 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 MAPK8P45983 427 aa17.67■□□□□ 0.42
SMAD4-201ENST00000342988 RPL14P50914 215 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms