RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 HIST1H2AHQ96KK5 128 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 HIST1H2AJQ99878 128 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 H2AFJQ9BTM1 129 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ACTR8Q9H981 624 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 EVPLLA8MZ36 301 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 PRKCGP05129 697 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 CYP4B1P13584 511 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SERPINB1P30740 379 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 NR1D2Q14995 579 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 NAPRTQ6XQN6 538 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 ARHGAP36Q6ZRI8 547 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 C19orf60Q96EN9 201 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 GBA3Q9H227 469 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SOX17Q9H6I2 414 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 RBMX2Q9Y388 322 aaKnown RBP12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
SNRNP48-201ENST00000342415 SMCHD1A6NHR9 2005 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 F5H5T6 163 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 UBXN8O00124 270 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 RGS4P49798 205 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CLCNKBP51801 687 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 C16orf59Q7L2K0 433 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 TRIM54Q9BYV2 358 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 DPY30Q9C005 99 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CXorf21Q9HAI6 301 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 RAB26Q9ULW5 256 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 TOR1BO14657 336 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CCT8P50990 548 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 PSMD5Q16401 504 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CTXN3Q4LDR2 81 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 TAC4Q86UU9 113 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 DQX1Q8TE96 717 aaKnown RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 PARVBQ9HBI1 364 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 KLQ9UEF7 1012 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CDH5P33151 784 aaPredicted RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CCNG1P51959 295 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CEACAM7Q14002 265 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 EPGNQ6UW88 154 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CCDC103Q8IW40 242 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 DCP1BQ8IZD4 617 aaKnown RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 LGI2Q8N0V4 545 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 ELMO1Q92556 727 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 TEKT5Q96M29 485 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 PCDHGB4Q9UN71 923 aa12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 EIF3LQ9Y262 564 aaKnown RBP12.47□□□□□ -0.41
SNRNP48-201ENST00000342415 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CXCL11O14625 94 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PGK1P00558 417 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 ALDH4A1P30038 563 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CPT1AP50416 773 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 MTTPP55157 894 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 SPIDRQ14159 915 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CTC1Q2NKJ3 1217 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 ANKRD23Q86SG2 305 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PIM3Q86V86 326 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 GPSM1Q86YR5 675 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 ALG2Q9H553 416 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 VTA1Q9NP79 307 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PDLIM7Q9NR12 457 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 A0A1B0GUL6 1792 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CFAP99D6REC4 459 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 COL4A1P02462 1669 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 NTRK1P04629 796 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 TFPTP0C1Z6 253 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 FCGR1AP12314 374 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 DARSP14868 501 aaKnown RBP12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CYP3A5P20815 502 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PPP3CCP48454 512 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 RAD23AP54725 363 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 PTPRCAPQ14761 206 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 MAPRE1Q15691 268 aaKnown RBP12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 OR52E8Q6IFG1 317 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 POTEHQ6S545 545 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 TAGAPQ8N103 731 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 NAV1Q8NEY1 1877 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 OR2T34Q8NGX1 318 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 STAG3L4Q8TBR4 150 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 OTULINQ96BN8 352 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 TEPSINQ96N21 525 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 C6orf62Q9GZU0 229 aaPredicted RBP12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 CLPBQ9H078 707 aa12.46□□□□□ -0.41
SNRNP48-201ENST00000342415 C1orf21Q9H246 121 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms