RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 MTHFRP42898 656 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 CHSY3Q70JA7 882 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 NODALQ96S42 347 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MRPL45Q9BRJ2 306 aaKnown RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 POLE4Q9NR33 117 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 TYW5A2RUC4 315 aaKnown RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 GCATO75600 419 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 PRKCHP24723 683 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MS4A2Q01362 244 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 COPS5Q92905 334 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 ESAMQ96AP7 390 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MTFMTQ96DP5 389 aaKnown RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 GLT1D1Q96MS3 346 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 GPR63Q9BZJ6 419 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 FBRSL1Q9HCM7 1045 aaKnown RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 PNPLA8Q9NP80 782 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 ARHGEF4Q9NR80 690 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 GIMAP2Q9UG22 337 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 RGPD8O14715 1765 aaPredicted RBP12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 B3GAT3O94766 335 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 NOS2P35228 1153 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 TRIM32Q13049 653 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 GPR158Q5T848 1215 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 TRIM63Q969Q1 353 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 LTN1O94822 1766 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 MSH3P20585 1137 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 SLC5A2P31639 672 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 PDZK1Q5T2W1 519 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 RAB2BQ8WUD1 216 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 DKK3Q9UBP4 350 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 VPS51Q9UID3 782 aa12.57□□□□□ -0.4
SSX2IP-201ENST00000342203 SLC2A3P11169 496 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 XPAP23025 273 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 CDKL1Q00532 357 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 C15orf52Q6ZUT6 534 aaKnown RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 FAM35AQ86V20 835 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ABI1Q8IZP0 508 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 GAB3Q8WWW8 586 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 QKIQ96PU8 341 aaKnown RBP eCLIP12.56□□□□□ -0.42e-12■■■■■ 81.1
SSX2IP-201ENST00000342203 HOPXQ9BPY8 73 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ACTR8Q9H981 624 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 AMBNQ9NP70 447 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 DUSP12Q9UNI6 340 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 CILPO75339 1184 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ZNF286BP0CG31 522 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 RGS4P49798 205 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ENKURQ8TC29 256 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 HERC2P3Q9BVR0 1158 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MIR1-1HGQ9H1L0 117 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 VWA7Q9Y334 891 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MFHAS1Q9Y4C4 1052 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 PMM2O15305 246 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 GRIN3BO60391 1043 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 RAB6CQ53S08 254 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 FGD3Q5JSP0 725 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MAPK15Q8TD08 544 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 TEKT5Q96M29 485 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 PEBP4Q96S96 227 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 RAB6CQ9H0N0 254 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ANGPTL1O95841 491 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 NTRK1P04629 796 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 ANXA6P08133 673 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 PIK3CGP48736 1102 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 NDST2P52849 883 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 MAPKAPK3Q16644 382 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 KBTBD6Q86V97 674 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 SHKBP1Q8TBC3 707 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 OXSMQ9NWU1 459 aa12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
SSX2IP-201ENST00000342203 TAS2R13Q9NYV9 303 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms