RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 GBA3Q9H227 469 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 PREBQ9HCU5 417 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 RXFP3Q9NSD7 469 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 DKK3Q9UBP4 350 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 CD84Q9UIB8 345 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 PILRBQ9UKJ0 227 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 SHOC2Q9UQ13 582 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.28
TUBD1-202ENST00000340993 AREL1O15033 823 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 LZTS3O60299 673 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-202ENST00000340993 METTL18O95568 372 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 AGTP01019 485 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 PRLP01236 227 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 RETP07949 1114 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 LHCGRP22888 699 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 HNF1BP35680 557 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 WNT3AP56704 352 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 RALGDSQ12967 914 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 SGCGQ13326 291 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 ACOX1Q15067 660 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 TCEA2Q15560 299 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 OASLQ15646 514 aaKnown RBP13.27□□□□□ -0.29
TUBD1-202ENST00000340993 PRAMEF14Q5SWL7 426 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 ALG1LQ6GMV1 187 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 RFLNAQ6ZTI6 216 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 CADM4Q8NFZ8 388 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 PIH1D2Q8WWB5 315 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 MAGOHBQ96A72 148 aaKnown RBP13.27□□□□□ -0.29
TUBD1-202ENST00000340993 MLPHQ9BV36 600 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-202ENST00000340993 FSD1LQ9BXM9 530 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 TM9SF3Q9HD45 589 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 FAM153AQ9UHL3 310 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 SPEGQ15772 3267 aa13.27□□□□□ -0.29
TUBD1-202ENST00000340993 PIEZO1Q92508 2521 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 CABIN1Q9Y6J0 2220 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 A0A1B0GVT2 93 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 A0A1W2PPC4 97 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 TSPAN11A1L157 253 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 BCAT2O15382 392 aaPredicted RBP13.26□□□□□ -0.29
TUBD1-202ENST00000340993 PCCBP05166 539 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 POLR2LP62875 67 aaKnown RBP13.26□□□□□ -0.29
TUBD1-202ENST00000340993 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
TUBD1-202ENST00000340993 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
TUBD1-202ENST00000340993 ELP6Q0PNE2 266 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 CNGA3Q16281 694 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 LRRC66Q68CR7 880 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 USP45Q70EL2 814 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 RASGEF1CQ8N431 466 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 RUBCNQ92622 972 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 FAM131CQ96AQ9 280 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 SLC17A9Q9BYT1 436 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 SEMA4GQ9NTN9 838 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 TRHDEQ9UKU6 1024 aa13.26□□□□□ -0.29
TUBD1-202ENST00000340993 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
TUBD1-202ENST00000340993 TSPAN6O43657 245 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 BUD23O43709 281 aaKnown RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 GDF9O60383 454 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 TM7SF2O76062 418 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CLDN7O95471 211 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CA4P22748 312 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CD27P26842 260 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 ETV3P41162 512 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 IRX4P78413 519 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CDK18Q07002 472 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 MTM1Q13496 603 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 ARHGEF7Q14155 803 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CCNG2Q16589 344 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 QPCTQ16769 361 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 SETMARQ53H47 684 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 KDELC1Q6UW63 502 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 PTAR1Q7Z6K3 402 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 TRIM69Q86WT6 500 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 C12orf50Q8NA57 414 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 RAB7BQ96AH8 199 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 MRGPRX2Q96LB1 330 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 VAT1Q99536 393 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 ORAI3Q9BRQ5 295 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 PHTF1Q9UMS5 762 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 A0A0J9YYE9 177 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 CCDC78A2IDD5 438 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 PROB1E7EW31 1015 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 SCAMP1O15126 338 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 FZD6O60353 706 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 OPHN1O60890 802 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 TRBC1P01850 177 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 WNT1P04628 370 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 C7P10643 843 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 GNSP15586 552 aa13.25□□□□□ -0.29
TUBD1-202ENST00000340993 TCP1P17987 556 aaKnown RBP13.25□□□□□ -0.29
TUBD1-202ENST00000340993 VIPR1P32241 457 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms